Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1981147Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 1982196Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (85 families) (S)
    contains a small beta-sheet (wing)
  5. 1982775Family a.4.5.24: Iron-dependent repressor protein [46882] (4 protein domains)
    automatically mapped to Pfam PF01325
  6. 1982860Protein automated matches [233395] (2 species)
    not a true protein

Species:

  1. 1982861Bacillus subtilis [TaxId:1423] [233396] (3 PDB entries)
    1. Domains for 3r60:
      1. 1982864Domain d3r60a1: 3r60 A:4-62 [233397]
        Other proteins in same PDB: d3r60a2, d3r60b2
        automated match to d1on1a1
        complexed with epe, fe2, pgo
      2. 1982865Domain d3r60b1: 3r60 B:4-62 [233401]
        Other proteins in same PDB: d3r60a2, d3r60b2
        automated match to d1on1a1
        complexed with epe, fe2, pgo
    2. Domains for 3r61:
      1. 1982866Domain d3r61a1: 3r61 A:4-62 [233403]
        Other proteins in same PDB: d3r61a2, d3r61b2
        automated match to d1on1a1
        complexed with co, epe
      2. 1982867Domain d3r61b1: 3r61 B:4-62 [233405]
        Other proteins in same PDB: d3r61a2, d3r61b2
        automated match to d1on1a1
        complexed with co, epe
    3. Domains for 4hx4:
      1. 1982862Domain d4hx4a1: 4hx4 A:3-62 [234729]
        Other proteins in same PDB: d4hx4a2, d4hx4b2
        automated match to d1on1a1
        complexed with mn; mutant
      2. 1982863Domain d4hx4b1: 4hx4 B:3-62 [234731]
        Other proteins in same PDB: d4hx4a2, d4hx4b2
        automated match to d1on1a1
        complexed with mn; mutant
  2. 1982868Bacillus subtilis [TaxId:224308] [234698] (4 PDB entries)
    1. Domains for 4hv5:
      1. 1982871Domain d4hv5a1: 4hv5 A:5-62 [252524]
        Other proteins in same PDB: d4hv5a2, d4hv5b2
        automated match to d3r60a1
        complexed with epe, fe2
      2. 1982872Domain d4hv5b1: 4hv5 B:4-62 [252526]
        Other proteins in same PDB: d4hv5a2, d4hv5b2
        automated match to d3r60a1
        complexed with epe, fe2
    2. Domains for 4hv6:
      1. 1982875Domain d4hv6a1: 4hv6 A:2-62 [234699]
        Other proteins in same PDB: d4hv6a2, d4hv6b2
        automated match to d1on1a1
        complexed with mg, mn; mutant
      2. 1982876Domain d4hv6b1: 4hv6 B:4-62 [234700]
        Other proteins in same PDB: d4hv6a2, d4hv6b2
        automated match to d1on1a1
        complexed with mg, mn; mutant
    3. Domains for 4hx7:
      1. 1982869Domain d4hx7a1: 4hx7 A:4-62 [252538]
        Other proteins in same PDB: d4hx7a2, d4hx7b2
        automated match to d4hx4a1
        complexed with cd; mutant
      2. 1982870Domain d4hx7b1: 4hx7 B:3-62 [252540]
        Other proteins in same PDB: d4hx7a2, d4hx7b2
        automated match to d4hx4a1
        complexed with cd; mutant
    4. Domains for 4hx8:
      1. 1982873Domain d4hx8a1: 4hx8 A:5-62 [252542]
        Other proteins in same PDB: d4hx8a2, d4hx8b2
        automated match to d4hx4a1
        mutant
      2. 1982874Domain d4hx8b1: 4hx8 B:4-62 [252544]
        Other proteins in same PDB: d4hx8a2, d4hx8b2
        automated match to d4hx4a1
        mutant

More info for Protein automated matches from a.4.5.24: Iron-dependent repressor protein

Timeline for Protein automated matches from a.4.5.24: Iron-dependent repressor protein: