Lineage for d1f8v.3 (1f8v C:,F:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2409884Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2410108Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2410520Family b.121.4.4: Nodaviridae-like VP [88638] (1 protein)
  6. 2410521Protein Alphanodavirus capsid protein [49648] (3 species)
  7. 2410530Species Pariacoto virus [TaxId:103782] [49651] (1 PDB entry)
  8. 2410533Domain d1f8v.3: 1f8v C:,F: [23331]
    protein/RNA complex; complexed with ca, so4

Details for d1f8v.3

PDB Entry: 1f8v (more details), 3 Å

PDB Description: the structure of pariacoto virus reveals a dodecahedral cage of duplex rna
PDB Compounds: (C:) mature capsid protein beta, (F:) mature capsid protein gamma

SCOPe Domain Sequences for d1f8v.3:

Sequence; same for both SEQRES and ATOM records: (download)

>g1f8v.3 b.121.4.4 (C:,F:) Alphanodavirus capsid protein {Pariacoto virus [TaxId: 103782]}

SCOPe Domain Coordinates for d1f8v.3:

Click to download the PDB-style file with coordinates for d1f8v.3.
(The format of our PDB-style files is described here.)

Timeline for d1f8v.3: