SCOPe 2.07: Domain d3p0ba1: 3p0b A:1-412

Lineage for d3p0ba1 (3p0b A:1-412)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.6: 7-stranded beta/alpha barrel [51988] (3 superfamilies)
   variant of beta/alpha barrel; parallel beta-sheet barrel, closed, n=7, S=8; strand order 1234567; some members may have fewer strands

4. Superfamily c.6.2: Glycoside hydrolase/deacetylase [88713] (9 families)
   in the different families beta-barrels are similarly distorted but may vary in the number of strands

5. Family c.6.2.4: AmyC N-terminal domain-like [102189] (3 proteins)
   automatically mapped to Pfam PF03065

6. Protein automated matches [233144] (1 species)
   not a true protein

7. Species Thermus thermophilus [TaxId:274] [233175] (1 PDB entry)

8. Domain d3p0ba1: 3p0b A:1-412 [233177]
   Other proteins in same PDB: d3p0ba2, d3p0ba3
   automated match to d1ufaa2
   complexed with gol

Details for d3p0ba1

PDB Entry: 3p0b, 1.35 Å

PDB Description: Thermus thermophilus family GH57 branching enzyme: crystal structure, mechanism of action and products formed

PDB Compounds: (A:) TT1467 protein

SCOPe Domain Sequences for d3p0ba1:

Sequence, based on SEQRES records:

>d3p0ba1 c.6.2.4 (A:1-412) automated matches {Thermus thermophilus [TaxId: 274]}
marfalvlhahlpyvrahgmwpfgeetlyeamaetylplirvlerlraegveapftlgit
pilaeqladarikegfwayakdrleraqgdyqryrgtaleasarhqvafweltldhfqrl
sgdlvaafrkaeeggqvelitsnathgyspllgydealwaqiktgvstyrrhfakdptgf
wlpemayrpkgpwkppvegppegvrpgvdellmragirytfvdahlvqggeplspygeaa
lgpvesqeatyhvhelesglrvlarnpettlqvwsadygypgeglyrefhrkdplsglhh
wrvthrkadlaekapydpeaafakteeharhfvgllerlagrhpegvilspydaelfghw
wyegvawleavlrllaqnpkvrpvtareavqgpavrtalpegswgrggdhrv

Sequence, based on observed residues (ATOM records):

>d3p0ba1 c.6.2.4 (A:1-412) automated matches {Thermus thermophilus [TaxId: 274]}
marfalvlhahlpyvrahgmwpfgeetlyeamaetylplirvlerlraegveapftlgit
pilaeqladarikegfwayakdrleraqgdyqryrgtaleasarhqvafweltldhfqrl
sgdlvaafrkaeeggqvelitsnathgyspllgydealwaqiktgvstyrrhfakdptgf
wlpemayrpkgpwkppvegppegvrpgvdellmragirytfvdahlvqggeplspvesqe
atyhvhelesglrvlarnpettlqvwsadygypgeglyrefhrkdplsglhhwrvthrka
dlaekapydpeaafakteeharhfvgllerlagrhpegvilspydaelfghwwyegvawl
eavlrllaqnpkvrpvtareavqgpavrtalpegswgrggdhrv

Timeline for d3p0ba1:

• d3p0ba1 first appeared in SCOPe 2.03
  
• d3p0ba1 appears in SCOPe 2.06
  
• d3p0ba1 appears in the current release, SCOPe 2.08