SCOPe 2.03: Domain d3oxna_: 3oxn A:

Lineage for d3oxna_ (3oxn A:)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
   Similar in architecture to the superfamily I but partly differs in topology

5. Family c.94.1.0: automated matches [191309] (1 protein)
   not a true family

6. Protein automated matches [190039] (57 species)
   not a true protein

7. Species Vibrio parahaemolyticus [TaxId:670] [233133] (1 PDB entry)

8. Domain d3oxna_: 3oxn A: [233134]
   automated match to d2y7wc_
   complexed with so4

Details for d3oxna_

PDB Entry: 3oxn, 2.7 Å

PDB Description: the crystal structure of a putative transcriptional regulator from vibrio parahaemolyticus

PDB Compounds: (A:) Putative transcriptional regulator, LysR family

SCOPe Domain Sequences for d3oxna_:

Sequence, based on SEQRES records:

>d3oxna_ c.94.1.0 (A:) automated matches {Vibrio parahaemolyticus [TaxId: 670]}
pqqcdqtftiattdyamqtilpfalpriyqeapnvsfnflplqhdrlsdqltyegadlai
crptgpveplrseilgrvgvlcllskqhplanqemslddylshphamiaisdgvkalieq
alidkpqrkmvlrayhleaalaivdtlpiiitvpadlaylvaerydlvvkplpfqftpfd
ysmiwharcehspaqewlrsvvreecsrliakrie

Sequence, based on observed residues (ATOM records):

>d3oxna_ c.94.1.0 (A:) automated matches {Vibrio parahaemolyticus [TaxId: 670]}
pqqcdqtftiattdyamqtilpfalpriyqeapnvsfnflplqhdrlsdqltyegadlai
crptgpveplrseilgrvgvlcllskqhplanqemslddylshphamiaisdgvkalieq
alidkpqrkmvlrayhleaalaivlpiiitvpadlaylvaerydlvvkplpfqftpfdys
miwharcehspaqewlrsvvreecsrliakrie

Timeline for d3oxna_:

• d3oxna_ is new in SCOPe 2.03-stable
  
• d3oxna_ appears in SCOPe 2.04
  
• d3oxna_ appears in the current release, SCOPe 2.08