Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2036241Fold b.6: Cupredoxin-like [49502] (2 superfamilies)
    sandwich; 7 strands in 2 sheets, greek-key
    variations: some members have additional 1-2 strands
  4. 2036242Superfamily b.6.1: Cupredoxins [49503] (8 families) (S)
    contains copper-binding site
  5. 2036810Family b.6.1.2: Periplasmic domain of cytochrome c oxidase subunit II [49541] (3 protein domains)
  6. 2036924Protein automated matches [233094] (2 species)
    not a true protein

Species:

  1. 2036925Cow (Bos taurus) [TaxId:9913] [255752] (2 PDB entries)
    1. Domains for 3asn:
      1. 2036926Domain d3asnb2: 3asn B:91-227 [245202]
        Other proteins in same PDB: d3asna_, d3asnb1, d3asnc_, d3asnd_, d3asne_, d3asnf_, d3asng_, d3asnh_, d3asni_, d3asnj_, d3asnk_, d3asnl_, d3asnm_, d3asnn_, d3asno1, d3asnp_, d3asnq_, d3asnr_, d3asns_, d3asnt_, d3asnu_, d3asnv_, d3asnw_, d3asnx_, d3asny_, d3asnz_
        automated match to d3ag3b2
        complexed with cdl, chd, cu, cua, dmu, hea, mg, na, pek, pgv, psc, tgl, unx, zn
      2. 2036927Domain d3asno2: 3asn O:91-227 [245216]
        Other proteins in same PDB: d3asna_, d3asnb1, d3asnc_, d3asnd_, d3asne_, d3asnf_, d3asng_, d3asnh_, d3asni_, d3asnj_, d3asnk_, d3asnl_, d3asnm_, d3asnn_, d3asno1, d3asnp_, d3asnq_, d3asnr_, d3asns_, d3asnt_, d3asnu_, d3asnv_, d3asnw_, d3asnx_, d3asny_, d3asnz_
        automated match to d3ag3b2
        complexed with cdl, chd, cu, cua, dmu, hea, mg, na, pek, pgv, psc, tgl, unx, zn
    2. Domains for 5x1b:
      1. 2294437Domain d5x1bb2: 5x1b B:91-227 [337738]
        Other proteins in same PDB: d5x1ba_, d5x1bb1, d5x1bc_, d5x1bd_, d5x1be_, d5x1bf_, d5x1bg_, d5x1bh_, d5x1bi_, d5x1bj_, d5x1bk_, d5x1bl_, d5x1bm_, d5x1bn_, d5x1bo1, d5x1bp_, d5x1bq_, d5x1br_, d5x1bs_, d5x1bt_, d5x1bu_, d5x1bv_, d5x1bw_, d5x1bx_, d5x1by_, d5x1bz_
        automated match to d3ag3b2
        complexed with cdl, chd, cmo, cu, cua, dmu, edo, hea, mg, na, pek, pgv, psc, tgl, unx, zn
      2. 2294504Domain d5x1bo2: 5x1b O:91-227 [337805]
        Other proteins in same PDB: d5x1ba_, d5x1bb1, d5x1bc_, d5x1bd_, d5x1be_, d5x1bf_, d5x1bg_, d5x1bh_, d5x1bi_, d5x1bj_, d5x1bk_, d5x1bl_, d5x1bm_, d5x1bn_, d5x1bo1, d5x1bp_, d5x1bq_, d5x1br_, d5x1bs_, d5x1bt_, d5x1bu_, d5x1bv_, d5x1bw_, d5x1bx_, d5x1by_, d5x1bz_
        automated match to d3ag3b2
        complexed with cdl, chd, cmo, cu, cua, dmu, edo, hea, mg, na, pek, pgv, psc, tgl, unx, zn
  2. 2036928Rhodobacter sphaeroides [TaxId:272943] [233095] (4 PDB entries)
    1. Domains for 3om3:
      1. 2036935Domain d3om3b2: 3om3 B:130-281 [233098]
        Other proteins in same PDB: d3om3a_, d3om3b1, d3om3b3, d3om3c_, d3om3d1, d3om3d3
        automated match to d1m56b1
        complexed with ca, cd, cu1, dmu, hea, hth, mg, trd; mutant
      2. 2036936Domain d3om3d2: 3om3 D:130-281 [233096]
        Other proteins in same PDB: d3om3a_, d3om3b1, d3om3b3, d3om3c_, d3om3d1, d3om3d3
        automated match to d1m56b1
        complexed with ca, cd, cu1, dmu, hea, hth, mg, trd; mutant
    2. Domains for 3oma:
      1. 2036931Domain d3omab2: 3oma B:130-281 [239572]
        Other proteins in same PDB: d3omaa_, d3omab1, d3omab3, d3omac_, d3omad1, d3omad3
        automated match to d3om3d2
        complexed with ca, cd, cu, cu1, dmu, hea, hth, mg, oh, trd; mutant
      2. 2036932Domain d3omad2: 3oma D:130-281 [239574]
        Other proteins in same PDB: d3omaa_, d3omab1, d3omab3, d3omac_, d3omad1, d3omad3
        automated match to d3om3d2
        complexed with ca, cd, cu, cu1, dmu, hea, hth, mg, oh, trd; mutant
    3. Domains for 3omi:
      1. 2036933Domain d3omib2: 3omi B:130-281 [239576]
        Other proteins in same PDB: d3omia_, d3omib1, d3omib3, d3omic_, d3omid1, d3omid3
        automated match to d3om3d2
        complexed with ca, cd, cl, cu, cu1, dmu, hea, hth, mg, oh, trd; mutant
      2. 2036934Domain d3omid2: 3omi D:130-281 [239578]
        Other proteins in same PDB: d3omia_, d3omib1, d3omib3, d3omic_, d3omid1, d3omid3
        automated match to d3om3d2
        complexed with ca, cd, cl, cu, cu1, dmu, hea, hth, mg, oh, trd; mutant
    4. Domains for 3omn:
      1. 2036929Domain d3omnb2: 3omn B:130-281 [239580]
        Other proteins in same PDB: d3omna_, d3omnb1, d3omnb3, d3omnc_, d3omnd1, d3omnd3
        automated match to d3om3d2
        complexed with ca, cd, cl, cu1, dmu, hea, hth, mg, oh, trd; mutant
      2. 2036930Domain d3omnd2: 3omn D:130-281 [239582]
        Other proteins in same PDB: d3omna_, d3omnb1, d3omnb3, d3omnc_, d3omnd1, d3omnd3
        automated match to d3om3d2
        complexed with ca, cd, cl, cu1, dmu, hea, hth, mg, oh, trd; mutant

More info for Protein automated matches from b.6.1.2: Periplasmic domain of cytochrome c oxidase subunit II

Timeline for Protein automated matches from b.6.1.2: Periplasmic domain of cytochrome c oxidase subunit II: