SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.87: DBL homology domain (DH-domain) [48064] (1 superfamily)
multihelical; core: 5-helical bundle
Superfamily a.87.1: DBL homology domain (DH-domain) [48065] (2 families)
automatically mapped to Pfam PF00621
Family a.87.1.0: automated matches [233075] (1 protein)
not a true family
Protein automated matches [233076] (2 species)
not a true protein

Species:

Human (Homo sapiens) [TaxId:9606] [233077] (2 PDB entries)
1. Domains for 3odo:
  1. Domain d3odoa1: 3odo A:395-623 [233079]
    Other proteins in same PDB: d3odoa2, d3odoa3, d3odob2, d3odob3
    automated match to d1xcga1
  2. Domain d3odob1: 3odo B:395-623 [233080]
    Other proteins in same PDB: d3odoa2, d3odoa3, d3odob2, d3odob3
    automated match to d1xcga1
2. Domains for 3p6a:
  1. Domain d3p6aa1: 3p6a A:411-623 [233153]
    Other proteins in same PDB: d3p6aa2, d3p6ab2
    automated match to d1xcga1
    mutant
  2. Domain d3p6ab1: 3p6a B:411-623 [233154]
    Other proteins in same PDB: d3p6aa2, d3p6ab2
    automated match to d1xcga1
    mutant
Mouse (Mus musculus) [TaxId:10090] [234557] (1 PDB entry)
- Domains for 4gyv:
  1. Domain d4gyva1: 4gyv A:536-747 [234562]
    Other proteins in same PDB: d4gyva2, d4gyvb2, d4gyvc2, d4gyvd2, d4gyve2, d4gyvf2, d4gyvg2, d4gyvh2, d4gyvi2
    automated match to d1by1a_
  2. Domain d4gyvb1: 4gyv B:536-747 [234560]
    Other proteins in same PDB: d4gyva2, d4gyvb2, d4gyvc2, d4gyvd2, d4gyve2, d4gyvf2, d4gyvg2, d4gyvh2, d4gyvi2
    automated match to d1by1a_
  3. Domain d4gyvc1: 4gyv C:536-747 [234561]
    Other proteins in same PDB: d4gyva2, d4gyvb2, d4gyvc2, d4gyvd2, d4gyve2, d4gyvf2, d4gyvg2, d4gyvh2, d4gyvi2
    automated match to d1by1a_
  4. Domain d4gyvd1: 4gyv D:536-747 [234563]
    Other proteins in same PDB: d4gyva2, d4gyvb2, d4gyvc2, d4gyvd2, d4gyve2, d4gyvf2, d4gyvg2, d4gyvh2, d4gyvi2
    automated match to d1by1a_
  5. Domain d4gyve1: 4gyv E:536-746 [240170]
    Other proteins in same PDB: d4gyva2, d4gyvb2, d4gyvc2, d4gyvd2, d4gyve2, d4gyvf2, d4gyvg2, d4gyvh2, d4gyvi2
    automated match to d4gyvb_
  6. Domain d4gyvf1: 4gyv F:536-747 [240171]
    Other proteins in same PDB: d4gyva2, d4gyvb2, d4gyvc2, d4gyvd2, d4gyve2, d4gyvf2, d4gyvg2, d4gyvh2, d4gyvi2
    automated match to d4gyvb_
  7. Domain d4gyvg1: 4gyv G:536-746 [240172]
    Other proteins in same PDB: d4gyva2, d4gyvb2, d4gyvc2, d4gyvd2, d4gyve2, d4gyvf2, d4gyvg2, d4gyvh2, d4gyvi2
    automated match to d4gyvb_
  8. Domain d4gyvh1: 4gyv H:536-747 [240173]
    Other proteins in same PDB: d4gyva2, d4gyvb2, d4gyvc2, d4gyvd2, d4gyve2, d4gyvf2, d4gyvg2, d4gyvh2, d4gyvi2
    automated match to d4gyvb_
  9. Domain d4gyvi1: 4gyv I:536-746 [240174]
    Other proteins in same PDB: d4gyva2, d4gyvb2, d4gyvc2, d4gyvd2, d4gyve2, d4gyvf2, d4gyvg2, d4gyvh2, d4gyvi2
    automated match to d4gyvb_

More info for Protein automated matches from a.87.1.0: automated matches

Timeline for Protein automated matches from a.87.1.0: automated matches:

Protein automated matches from a.87.1.0: automated matches first appeared in SCOPe 2.03
Protein automated matches from a.87.1.0: automated matches appears in SCOPe 2.07