SCOPe 2.08: Domain d3nuib1: 3nui B:30-453

Lineage for d3nuib1 (3nui B:30-453)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.0: automated matches [191328] (1 protein)
   not a true family

6. Protein automated matches [190151] (166 species)
   not a true protein

7. Species Vibrio fluvialis [TaxId:676] [233050] (4 PDB entries)

8. Domain d3nuib1: 3nui B:30-453 [233051]
   Other proteins in same PDB: d3nuia2, d3nuib2
   automated match to d3n5ma_

Details for d3nuib1

PDB Entry: 3nui, 2 Å

PDB Description: crystal structure of omega-transferase from vibrio fluvialis js17

PDB Compounds: (B:) Pyruvate transaminase

SCOPe Domain Sequences for d3nuib1:

Sequence, based on SEQRES records:

>d3nuib1 c.67.1.0 (B:30-453) automated matches {Vibrio fluvialis [TaxId: 676]}
tvvvthgegpyivdvngrryldansglwnmvagfdhkglidaakaqyerfpgyhaffgrm
sdqtvmlseklvevspfdsgrvfytnsgseandtmvkmlwflhaaegkpqkrkiltrwna
yhgvtavsasmtgkpynsvfglplpgfvhltcphywrygeegeteeqfvarlareleeti
qregadtiagffaepvmgaggvippakgyfqailpilrkydipvisdevicgfgrtgntw
gcvtydftpdaiissknltagffpmgavilgpelskrletaieaieefphgftasghpvg
caialkaidvvmneglaenvrrlaprfeerlkhiaerpnigeyrgigfmwaleavkdkas
ktpfdgnlsvseriantctdlglicrplgqsvvlcppfilteaqmdemfdklekaldkvf
aeva

Sequence, based on observed residues (ATOM records):

>d3nuib1 c.67.1.0 (B:30-453) automated matches {Vibrio fluvialis [TaxId: 676]}
tvvvthgegpyivdvngrryldansglwnmvagfdhkglidaakaqyerfpgyhaffgrm
sdqtvmlseklvevspfdsgrvfytnsgseandtmvkmlwflhaaegkpqkrkiltrwna
yasmtgkpynsvfglplpgfvhltcphywrygeegeteeqfvarlareleetiqregadt
iagffaepvmgaggvippakgyfqailpilrkydipvisdevicgfgrtgntwgcvtydf
tpdaiissknltagffpmgavilgpelskrletaieaieefphgftasghpvgcaialka
idvvmneglaenvrrlaprfeerlkhiaerpnigeyrgigfmwaleavkdkasktpfdgn
lsvseriantctdlglicrplgqsvvlcppfilteaqmdemfdklekaldkvfaeva

Timeline for d3nuib1:

• d3nuib1 first appeared in SCOPe 2.03, called d3nuib_
  
• d3nuib1 appears in SCOPe 2.07