SCOPe 2.08: Domain d3loma1: 3lom A:8-309

Lineage for d3loma1 (3lom A:8-309)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.128: Terpenoid synthases [48575] (1 superfamily)
   multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

4. Superfamily a.128.1: Terpenoid synthases [48576] (6 families)
   duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J

5. Family a.128.1.0: automated matches [196408] (1 protein)
   not a true family

6. Protein automated matches [196409] (46 species)
   not a true protein

7. Species Legionella pneumophila [TaxId:272624] [232849] (1 PDB entry)

8. Domain d3loma1: 3lom A:8-309 [232850]
   Other proteins in same PDB: d3loma2
   automated match to d4lltb_
   complexed with po4

Details for d3loma1

PDB Entry: 3lom, 2.3 Å

PDB Description: crystal structure of geranyltransferase from legionella pneumophila

PDB Compounds: (A:) Geranyltranstransferase

SCOPe Domain Sequences for d3loma1:

Sequence, based on SEQRES records:

>d3loma1 a.128.1.0 (A:8-309) automated matches {Legionella pneumophila [TaxId: 272624]}
nstqmnkqvidkytqrhelyleqllneiiipapqirsalhyalfsggkrirpilvylagd
lidvdqgvldiiaaalelthcyslihddlpamdnddlrrgkpschkafdeatailvgdgm
qalaievllmrlspllpaaqvvaitqvlvnasgisgmvsgqsldlselakssvteeqlre
ihllktgklilacfemvlaaqhevseqiksalrtygkhiglvfqmqddyldlyaptqilg
kgrssdqanqkttfatlfnkqqleeeiavhyqiamdslrlfgskaaalieltkqlqnrsn
ls

Sequence, based on observed residues (ATOM records):

>d3loma1 a.128.1.0 (A:8-309) automated matches {Legionella pneumophila [TaxId: 272624]}
nstqmnkqvidkytqrhelyleqllneiiipapqirsalhyalfsggkrirpilvylagd
lidvdqgvldiiaaalelthcyslihddlpamdnddlrrgkpschkafdeatailvgdgm
qalaievllmrlspllpaaqvvaitqvlvnasgisgmvsgqsldlselakssvteeqlre
ihllktgklilacfemvlaaqhevseqiksalrtygkhiglvfqmqddyldlyapkttfa
tlfnkqqleeeiavhyqiamdslrlfgskaaalieltkqlqnrsnls

Timeline for d3loma1:

• d3loma1 first appeared in SCOPe 2.03, called d3loma_
  
• d3loma1 appears in SCOPe 2.07