SCOPe 2.04: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.04
Class b: All beta proteins [48724] (176 folds)
Fold b.69: 7-bladed beta-propeller [50964] (14 superfamilies)
consists of seven 4-stranded beta-sheet motifs; meander
Superfamily b.69.2: YVTN repeat-like/Quinoprotein amine dehydrogenase [50969] (4 families)
Family b.69.2.0: automated matches [232760] (1 protein)
not a true family
Protein automated matches [232762] (1 species)
not a true protein

Species:

Paracoccus denitrificans [TaxId:318586] [232763] (18 PDB entries)

Domains for 2gc4:

Domain d2gc4a_: 2gc4 A: [134934]
Other proteins in same PDB: d2gc4b_, d2gc4c_, d2gc4d_, d2gc4f_, d2gc4g_, d2gc4h_, d2gc4j_, d2gc4k_, d2gc4l_, d2gc4n_, d2gc4o_, d2gc4p_
automated match to d3l4od_
complexed with cu, hem, na

Domain d2gc4e_: 2gc4 E: [134938]
Other proteins in same PDB: d2gc4b_, d2gc4c_, d2gc4d_, d2gc4f_, d2gc4g_, d2gc4h_, d2gc4j_, d2gc4k_, d2gc4l_, d2gc4n_, d2gc4o_, d2gc4p_
automated match to d3l4od_
complexed with cu, hem, na

Domain d2gc4i_: 2gc4 I: [134942]
Other proteins in same PDB: d2gc4b_, d2gc4c_, d2gc4d_, d2gc4f_, d2gc4g_, d2gc4h_, d2gc4j_, d2gc4k_, d2gc4l_, d2gc4n_, d2gc4o_, d2gc4p_
automated match to d3l4od_
complexed with cu, hem, na

Domain d2gc4m_: 2gc4 M: [134946]
Other proteins in same PDB: d2gc4b_, d2gc4c_, d2gc4d_, d2gc4f_, d2gc4g_, d2gc4h_, d2gc4j_, d2gc4k_, d2gc4l_, d2gc4n_, d2gc4o_, d2gc4p_
automated match to d3l4od_
complexed with cu, hem, na

Domains for 2gc7:

Domain d2gc7a_: 2gc7 A: [134954]
Other proteins in same PDB: d2gc7b_, d2gc7c_, d2gc7d_, d2gc7f_, d2gc7g_, d2gc7h_, d2gc7j_, d2gc7k_, d2gc7l_, d2gc7n_, d2gc7o_, d2gc7p_
automated match to d3l4od_
complexed with hem, na

Domain d2gc7e_: 2gc7 E: [134958]
Other proteins in same PDB: d2gc7b_, d2gc7c_, d2gc7d_, d2gc7f_, d2gc7g_, d2gc7h_, d2gc7j_, d2gc7k_, d2gc7l_, d2gc7n_, d2gc7o_, d2gc7p_
automated match to d3l4od_
complexed with hem, na

Domain d2gc7i_: 2gc7 I: [134962]
Other proteins in same PDB: d2gc7b_, d2gc7c_, d2gc7d_, d2gc7f_, d2gc7g_, d2gc7h_, d2gc7j_, d2gc7k_, d2gc7l_, d2gc7n_, d2gc7o_, d2gc7p_
automated match to d3l4od_
complexed with hem, na

Domain d2gc7m_: 2gc7 M: [134966]
Other proteins in same PDB: d2gc7b_, d2gc7c_, d2gc7d_, d2gc7f_, d2gc7g_, d2gc7h_, d2gc7j_, d2gc7k_, d2gc7l_, d2gc7n_, d2gc7o_, d2gc7p_
automated match to d3l4od_
complexed with hem, na

Domains for 2j55:
1. Domain d2j55h_: 2j55 H: [138015]
  Other proteins in same PDB: d2j55a_, d2j55b_, d2j55l1, d2j55m_
  automated match to d3l4od_
  complexed with cu, gol
2. Domain d2j55j_: 2j55 J: [138016]
  Other proteins in same PDB: d2j55a_, d2j55b_, d2j55l1, d2j55m_
  automated match to d3l4od_
  complexed with cu, gol
Domains for 2j56:
1. Domain d2j56h_: 2j56 H: [138019]
  Other proteins in same PDB: d2j56a_, d2j56b_, d2j56l_, d2j56m_
  automated match to d3l4od_
  complexed with cu, gol, na
2. Domain d2j56j_: 2j56 J: [138020]
  Other proteins in same PDB: d2j56a_, d2j56b_, d2j56l_, d2j56m_
  automated match to d3l4od_
  complexed with cu, gol, na
Domains for 2j57:
1. Domain d2j57g_: 2j57 G: [138025]
  Other proteins in same PDB: d2j57a_, d2j57b_, d2j57c_, d2j57d_, d2j57k_, d2j57l_, d2j57m_, d2j57n_
  automated match to d3l4od_
  complexed with cu
2. Domain d2j57h_: 2j57 H: [138026]
  Other proteins in same PDB: d2j57a_, d2j57b_, d2j57c_, d2j57d_, d2j57k_, d2j57l_, d2j57m_, d2j57n_
  automated match to d3l4od_
  complexed with cu
3. Domain d2j57i_: 2j57 I: [138027]
  Other proteins in same PDB: d2j57a_, d2j57b_, d2j57c_, d2j57d_, d2j57k_, d2j57l_, d2j57m_, d2j57n_
  automated match to d3l4od_
  complexed with cu
4. Domain d2j57j_: 2j57 J: [138028]
  Other proteins in same PDB: d2j57a_, d2j57b_, d2j57c_, d2j57d_, d2j57k_, d2j57l_, d2j57m_, d2j57n_
  automated match to d3l4od_
  complexed with cu
Domains for 3l4m:
1. Domain d3l4md_: 3l4m D: [232808]
  Other proteins in same PDB: d3l4mc_, d3l4me_
  automated match to d2madh_
  complexed with 1pe, act, ca, hec, pg4
2. Domain d3l4mf_: 3l4m F: [232787]
  Other proteins in same PDB: d3l4mc_, d3l4me_
  automated match to d2madh_
  complexed with 1pe, act, ca, hec, pg4
Domains for 3l4o:
1. Domain d3l4od_: 3l4o D: [232782]
  Other proteins in same PDB: d3l4oc_, d3l4oe_
  automated match to d2madh_
  complexed with 1pe, act, ca, hec, pg4
2. Domain d3l4of_: 3l4o F: [232764]
  Other proteins in same PDB: d3l4oc_, d3l4oe_
  automated match to d2madh_
  complexed with 1pe, act, ca, hec, pg4
Domains for 3orv:
1. Domain d3orvd_: 3orv D: [233122]
  Other proteins in same PDB: d3orvc_, d3orve_
  automated match to d2madh_
  complexed with ca, edo, hec, p6g, peg, pg4, pge
2. Domain d3orvf_: 3orv F: [233123]
  Other proteins in same PDB: d3orvc_, d3orve_
  automated match to d2madh_
  complexed with ca, edo, hec, p6g, peg, pg4, pge
Domains for 3pxs:
1. Domain d3pxsd_: 3pxs D: [233293]
  Other proteins in same PDB: d3pxsc_, d3pxse_
  automated match to d2madh_
  complexed with act, ca, hec, na, pg4, pg6
2. Domain d3pxsf_: 3pxs F: [233294]
  Other proteins in same PDB: d3pxsc_, d3pxse_
  automated match to d2madh_
  complexed with act, ca, hec, na, pg4, pg6
Domains for 3pxt:
1. Domain d3pxtd_: 3pxt D: [233295]
  Other proteins in same PDB: d3pxtc_, d3pxte_
  automated match to d2madh_
  complexed with act, ca, cmo, hec, na, pg6
2. Domain d3pxtf_: 3pxt F: [233296]
  Other proteins in same PDB: d3pxtc_, d3pxte_
  automated match to d2madh_
  complexed with act, ca, cmo, hec, na, pg6
Domains for 3rlm:
1. Domain d3rlmd_: 3rlm D: [233455]
  Other proteins in same PDB: d3rlmc_, d3rlme_
  automated match to d2madh_
  complexed with act, ca, hec, pge
2. Domain d3rlmf_: 3rlm F: [233456]
  Other proteins in same PDB: d3rlmc_, d3rlme_
  automated match to d2madh_
  complexed with act, ca, hec, pge
Domains for 3rmz:
1. Domain d3rmzd_: 3rmz D: [233461]
  Other proteins in same PDB: d3rmzc_, d3rmze_
  automated match to d2madh_
  complexed with act, ca, edo, hec, mes, na, p6g, peg, pg4
2. Domain d3rmzf_: 3rmz F: [233462]
  Other proteins in same PDB: d3rmzc_, d3rmze_
  automated match to d2madh_
  complexed with act, ca, edo, hec, mes, na, p6g, peg, pg4
Domains for 3rn0:
1. Domain d3rn0d_: 3rn0 D: [233463]
  Other proteins in same PDB: d3rn0c_, d3rn0e_
  automated match to d2madh_
  complexed with ca, hec, mes, na, p6g, pg4
2. Domain d3rn0f_: 3rn0 F: [233464]
  Other proteins in same PDB: d3rn0c_, d3rn0e_
  automated match to d2madh_
  complexed with ca, hec, mes, na, p6g, pg4
Domains for 3rn1:
1. Domain d3rn1d_: 3rn1 D: [233465]
  Other proteins in same PDB: d3rn1c_, d3rn1e_
  automated match to d2madh_
  complexed with 1pe, act, ca, edo, hec, na, pg4
2. Domain d3rn1f_: 3rn1 F: [233466]
  Other proteins in same PDB: d3rn1c_, d3rn1e_
  automated match to d2madh_
  complexed with 1pe, act, ca, edo, hec, na, pg4
Domains for 3sjl:
1. Domain d3sjld_: 3sjl D: [233534]
  Other proteins in same PDB: d3sjlc_, d3sjle_
  automated match to d2madh_
  complexed with ca, edo, hec, mes, na, peg
2. Domain d3sjlf_: 3sjl F: [233535]
  Other proteins in same PDB: d3sjlc_, d3sjle_
  automated match to d2madh_
  complexed with ca, edo, hec, mes, na, peg
Domains for 3svw:
1. Domain d3svwd_: 3svw D: [233646]
  Other proteins in same PDB: d3svwc_, d3svwe_
  automated match to d2madh_
  complexed with act, ca, edo, hec, mes, na, peg, pge
2. Domain d3svwf_: 3svw F: [233647]
  Other proteins in same PDB: d3svwc_, d3svwe_
  automated match to d2madh_
  complexed with act, ca, edo, hec, mes, na, peg, pge
Domains for 3sws:
1. Domain d3swsd_: 3sws D: [233649]
  Other proteins in same PDB: d3swsc_, d3swse_
  automated match to d2madh_
  complexed with 1pe, act, ca, edo, hec, mes, na, pg4
2. Domain d3swsf_: 3sws F: [233650]
  Other proteins in same PDB: d3swsc_, d3swse_
  automated match to d2madh_
  complexed with 1pe, act, ca, edo, hec, mes, na, pg4
Domains for 3sxt:
1. Domain d3sxtd_: 3sxt D: [233651]
  Other proteins in same PDB: d3sxtc_, d3sxte_
  automated match to d2madh_
  complexed with ca, edo, hec, na
2. Domain d3sxtf_: 3sxt F: [233652]
  Other proteins in same PDB: d3sxtc_, d3sxte_
  automated match to d2madh_
  complexed with ca, edo, hec, na

More info for Protein automated matches from b.69.2.0: automated matches

Timeline for Protein automated matches from b.69.2.0: automated matches:

Protein automated matches from b.69.2.0: automated matches first appeared in SCOPe 2.03
Protein automated matches from b.69.2.0: automated matches appears in SCOPe 2.05
Protein automated matches from b.69.2.0: automated matches appears in the current release, SCOPe 2.08