SCOPe 2.04: Domain d3ir7a1: 3ir7 A:1-1074

Lineage for d3ir7a1 (3ir7 A:1-1074)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.81: Formate dehydrogenase/DMSO reductase, domains 1-3 [53705] (1 superfamily)
   contains of two similar intertwined domains related by pseudo dyad; duplication
   core: 3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32451

4. Superfamily c.81.1: Formate dehydrogenase/DMSO reductase, domains 1-3 [53706] (1 family)
   molybdopterine enzyme

5. Family c.81.1.1: Formate dehydrogenase/DMSO reductase, domains 1-3 [53707] (11 proteins)
   domain 1 (residues 1-55) binds Fe4S4 cluster in FDH but not DMSO reductase

6. Protein automated matches [227025] (4 species)
   not a true protein

7. Species Escherichia coli K-12 [TaxId:83333] [232054] (4 PDB entries)

8. Domain d3ir7a1: 3ir7 A:1-1074 [232617]
   Other proteins in same PDB: d3ir7a2, d3ir7b_, d3ir7c_
   automated match to d1q16a2
   complexed with 6mo, aga, f3s, hem, md1, sf4; mutant

Details for d3ir7a1

PDB Entry: 3ir7, 2.5 Å

PDB Description: crystal structure of narghi mutant narg-r94s

PDB Compounds: (A:) Respiratory nitrate reductase 1 alpha chain

SCOPe Domain Sequences for d3ir7a1:

Sequence, based on SEQRES records:

>d3ir7a1 c.81.1.1 (A:1-1074) automated matches {Escherichia coli K-12 [TaxId: 83333]}
skfldrfryfkqkgetfadghgqllntnrdwedgyrqrwqhdkivrsthgvnctgscswk
iyvknglvtwetqqtdyprtrpdlpnheprgcpsgasyswylysanrlkypmmrkrlmkm
wreakalhsdpveawasiiedadkaksfkqargrggfvrsswqevneliaasnvytikny
gpdrvagfspipamsmvsyasgarylsliggtclsfydwycdlppaspqtwgeqtdvpes
adwynssyiiawgsnvpqtrtpdahfftevrykgtktvavtpdyaeiaklcdlwlapkqg
tdaamalamghvmlrefhldnpsqyftdyvrrytdmpmlvmleerdgyyaagrmlraadl
vdalgqennpewktvafntngemvapngsigfrwgekgkwnleqrdgktgeetelqlsll
gsqdeiaevgfpyfggdgtehfnkvelenvllhklpvkrlqladgstalvttvydltlan
yglerglndvncatsyddvkaytpawaeqitgvsrsqiiriarefadnadkthgrsmiiv
gaglnhwyhldmnyrglinmlifcgcvgqsgggwahyvgqeklrpqtgwqplafaldwqr
parhmnstsyfynhssqwryetvtaeellspmadksrytghlidfnvraermgwlpsapq
lgtnpltiageaekagmnpvdytvkslkegsirfaaeqpengknhprnlfiwrsnllgss
gkghefmlkyllgtehgiqgkdlgqqggvkpeevdwqdnglegkldlvvtldfrlsstcl
ysdiilptatwyekddmntsdmhpfihplsaavdpaweaksdweiykaiakkfsevcvgh
lgketdivtlpiqhdsaaelaqpldvkdwkkgecdlipgktaphimvverdypatyerft
sigplmekignggkgiawntqsemdllrklnytkaegpakgqpmlntaidaaemiltlap
etngqvavkawaalseftgrdhthlalnkedekirfrdiqaqprkiissptwsgledehv
synagytnvhelipwrtlsgrqqlyqdhqwmrdfgesllvyrppidtrsvkevi

Sequence, based on observed residues (ATOM records):

>d3ir7a1 c.81.1.1 (A:1-1074) automated matches {Escherichia coli K-12 [TaxId: 83333]}
skfldrffkqkgetfadghgqllntnrdwedgyrqrwqhdkivrsthgvnctgscswkiy
vknglvtwetqqtdyprtrpdlpnheprgcpsgasyswylysanrlkypmmrkrlmkmwr
eakalhsdpveawasiiedadkaksfkqargrggfvrsswqevneliaasnvytiknygp
drvagfspipamsmvsyasgarylsliggtclsfydwycdlppaspqtwgeqtdvpesad
wynssyiiawgsnvpqtrtpdahfftevrykgtktvavtpdyaeiaklcdlwlapkqgtd
aamalamghvmlrefhldnpsqyftdyvrrytdmpmlvmleerdgyyaagrmlraadlvd
algqennpewktvafntngemvapngsigfrwgekgkwnleqrdgktgeetelqlsllgs
qdeiaevgfpyfggdgtehfnkvelenvllhklpvkrlqladgstalvttvydltlanyg
lerglndvncatsyddvkaytpawaeqitgvsrsqiiriarefadnadkthgrsmiivga
glnhwyhldmnyrglinmlifcgcvgqsgggwahyvgqeklrpqtgwqplafaldwqrpa
rhmnstsyfynhssqwryetvtaeellspmadksrytghlidfnvraermgwlpsapqlg
tnpltiageaekagmnpvdytvkslkegsirfaaeqpengknhprnlfiwrsnllgssgk
ghefmlkyllgtehgiqgkdlgqqggvkpeevdwqdnglegkldlvvtldfrlsstclys
diilptatwyekddmntsdmhpfihplsaavdpaweaksdweiykaiakkfsevcvghlg
ketdivtlpiqhdsaaelaqpldvkdwkkgecdlipgktaphimvverdypatyerftsi
gplmekignggkgiawntqsemdllrklnytkaegpakgqpmlntaidaaemiltlapet
ngqvavkawaalseftgrdhthlalnkedekirfrdiqaqprkiissptwsgledehvsy
nagytnvhelipwrtlsgrqqlyqdhqwmrdfgesllvyrppidtrsvkevi

Timeline for d3ir7a1:

• d3ir7a1 first appeared in SCOPe 2.03
  
• d3ir7a1 appears in SCOPe 2.05
  
• d3ir7a1 appears in the current release, SCOPe 2.08