SCOPe 2.05: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.05
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.51: Anticodon-binding domain-like [52953] (6 superfamilies)
3 layers: a/b/a; mixed beta-sheet of five strands, order 21345; strand 4 is antiparallel to the rest
Superfamily c.51.2: TolB, N-terminal domain [52964] (2 families)
Family c.51.2.0: automated matches [232575] (1 protein)
not a true family
Protein automated matches [232576] (2 species)
not a true protein

Species:

Escherichia coli [TaxId:562] [232577] (2 PDB entries)
1. Domains for 2w8b:
  1. Domain d2w8ba1: 2w8b A:22-161 [238928]
    Other proteins in same PDB: d2w8ba2, d2w8bb2, d2w8bc_, d2w8bd2, d2w8be_, d2w8bf2, d2w8bg_, d2w8bh_
    automated match to d2ivza2
    complexed with act, gol, so4
  2. Domain d2w8bb1: 2w8b B:22-161 [238930]
    Other proteins in same PDB: d2w8ba2, d2w8bb2, d2w8bc_, d2w8bd2, d2w8be_, d2w8bf2, d2w8bg_, d2w8bh_
    automated match to d2ivza2
    complexed with act, gol, so4
  3. Domain d2w8bd1: 2w8b D:22-161 [238932]
    Other proteins in same PDB: d2w8ba2, d2w8bb2, d2w8bc_, d2w8bd2, d2w8be_, d2w8bf2, d2w8bg_, d2w8bh_
    automated match to d2ivza2
    complexed with act, gol, so4
  4. Domain d2w8bf1: 2w8b F:22-161 [238934]
    Other proteins in same PDB: d2w8ba2, d2w8bb2, d2w8bc_, d2w8bd2, d2w8be_, d2w8bf2, d2w8bg_, d2w8bh_
    automated match to d2ivza2
    complexed with act, gol, so4
2. Domain for 3iax:
  - Domain d3iaxa1: 3iax A:32-161 [232578]
    Other proteins in same PDB: d3iaxa2
    automated match to d2ivza2
    complexed with ca, gol, na
Yersinia pestis [TaxId:214092] [256379] (2 PDB entries)
1. Domains for 4pwz:
  1. Domain d4pwza1: 4pwz A:23-161 [254099]
    Other proteins in same PDB: d4pwza2, d4pwzb2
    automated match to d2ivza2
    complexed with gol, mes, peg, so4
  2. Domain d4pwzb1: 4pwz B:1-161 [254101]
    Other proteins in same PDB: d4pwza2, d4pwzb2
    automated match to d2ivza2
    complexed with gol, mes, peg, so4
2. Domains for 4r40:
  1. Domain d4r40a1: 4r40 A:23-161 [263809]
    Other proteins in same PDB: d4r40a2, d4r40b_, d4r40c2, d4r40d_
    automated match to d4pwza1
    complexed with fmt, gol, so4
  2. Domain d4r40c1: 4r40 C:23-161 [259514]
    Other proteins in same PDB: d4r40a2, d4r40b_, d4r40c2, d4r40d_
    automated match to d4pwza1
    complexed with fmt, gol, so4

More info for Protein automated matches from c.51.2.0: automated matches

Timeline for Protein automated matches from c.51.2.0: automated matches:

Protein automated matches from c.51.2.0: automated matches first appeared in SCOPe 2.03
Protein automated matches from c.51.2.0: automated matches appears in SCOPe 2.04
Protein automated matches from c.51.2.0: automated matches appears in SCOPe 2.06
Protein automated matches from c.51.2.0: automated matches appears in the current release, SCOPe 2.08