Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2120781Fold c.51: Anticodon-binding domain-like [52953] (6 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of five strands, order 21345; strand 4 is antiparallel to the rest
  4. 2120933Superfamily c.51.2: TolB, N-terminal domain [52964] (2 families) (S)
  5. 2120947Family c.51.2.0: automated matches [232575] (1 protein)
    not a true family
  6. 2120948Protein automated matches [232576] (2 species)
    not a true protein

Species:

  1. 2120949Escherichia coli [TaxId:562] [232577] (2 PDB entries)
    1. Domains for 2w8b:
      1. 2120950Domain d2w8ba1: 2w8b A:22-161 [238928]
        Other proteins in same PDB: d2w8ba2, d2w8bb2, d2w8bc_, d2w8bd2, d2w8be1, d2w8be2, d2w8bf2, d2w8bg1, d2w8bg2, d2w8bh1, d2w8bh2
        automated match to d2ivza2
        complexed with act, gol, so4
      2. 2120951Domain d2w8bb1: 2w8b B:22-161 [238930]
        Other proteins in same PDB: d2w8ba2, d2w8bb2, d2w8bc_, d2w8bd2, d2w8be1, d2w8be2, d2w8bf2, d2w8bg1, d2w8bg2, d2w8bh1, d2w8bh2
        automated match to d2ivza2
        complexed with act, gol, so4
      3. 2120952Domain d2w8bd1: 2w8b D:22-161 [238932]
        Other proteins in same PDB: d2w8ba2, d2w8bb2, d2w8bc_, d2w8bd2, d2w8be1, d2w8be2, d2w8bf2, d2w8bg1, d2w8bg2, d2w8bh1, d2w8bh2
        automated match to d2ivza2
        complexed with act, gol, so4
      4. 2120953Domain d2w8bf1: 2w8b F:22-161 [238934]
        Other proteins in same PDB: d2w8ba2, d2w8bb2, d2w8bc_, d2w8bd2, d2w8be1, d2w8be2, d2w8bf2, d2w8bg1, d2w8bg2, d2w8bh1, d2w8bh2
        automated match to d2ivza2
        complexed with act, gol, so4
    2. Domain for 3iax:
  2. 2120955Yersinia pestis [TaxId:214092] [256379] (2 PDB entries)
    1. Domains for 4pwz:
      1. 2120956Domain d4pwza1: 4pwz A:23-161 [254099]
        Other proteins in same PDB: d4pwza2, d4pwzb2, d4pwzb3
        automated match to d2ivza2
        complexed with gol, mes, peg, so4
      2. 2120957Domain d4pwzb1: 4pwz B:23-161 [254101]
        Other proteins in same PDB: d4pwza2, d4pwzb2, d4pwzb3
        automated match to d2ivza2
        complexed with gol, mes, peg, so4
    2. Domains for 4r40:
      1. 2120958Domain d4r40a1: 4r40 A:23-161 [263809]
        Other proteins in same PDB: d4r40a2, d4r40b_, d4r40c2, d4r40d_
        automated match to d4pwza1
        complexed with fmt, gol, so4
      2. 2120959Domain d4r40c1: 4r40 C:23-161 [259514]
        Other proteins in same PDB: d4r40a2, d4r40b_, d4r40c2, d4r40d_
        automated match to d4pwza1
        complexed with fmt, gol, so4

More info for Protein automated matches from c.51.2.0: automated matches

Timeline for Protein automated matches from c.51.2.0: automated matches: