Lineage for d3h8bc_ (3h8b C:)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2154577Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2154578Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2155423Family d.3.1.0: automated matches [191342] (1 protein)
    not a true family
  6. 2155424Protein automated matches [190230] (20 species)
    not a true protein
  7. 2155438Species Human (Homo sapiens) [TaxId:9606] [187072] (42 PDB entries)
  8. 2155453Domain d3h8bc_: 3h8b C: [232429]
    automated match to d2xu3a_
    complexed with nsy

Details for d3h8bc_

PDB Entry: 3h8b (more details), 1.8 Å

PDB Description: A combined crystallographic and molecular dynamics study of cathepsin-L retro-binding inhibitors(compound 9)
PDB Compounds: (C:) Cathepsin L1

SCOPe Domain Sequences for d3h8bc_:

Sequence, based on SEQRES records: (download)

>d3h8bc_ d.3.1.0 (C:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
aprsvdwrekgyvtpvknqgqcgscwafsatgalegqmfrktgrlislseqnlvdcsgpq
gnegcngglmdyafqyvqdnggldseesypyeateesckynpkysvandtgfvdipkqek
almkavatvgpisvaidaghesflfykegiyfepdcssedmdhgvlvvgygfestesdnn
kywlvknswgeewgmggyvkmakdrrnhcgiasaasyptv

Sequence, based on observed residues (ATOM records): (download)

>d3h8bc_ d.3.1.0 (C:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
aprsvdwrekgyvtpvknqgqcgscwafsatgalegqmfrktgrlislseqnlvdcsgpq
gnegcngglmdyafqyvqdnggldseesypyeateesckynpkysvandtgfvdipkqek
almkavatvgpisvaidaghesflfykegiyfepdcssedmdhgvlvvgygfesnkywlv
knswgeewgmggyvkmakdrrnhcgiasaasyptv

SCOPe Domain Coordinates for d3h8bc_:

Click to download the PDB-style file with coordinates for d3h8bc_.
(The format of our PDB-style files is described here.)

Timeline for d3h8bc_: