Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2256768Class g: Small proteins [56992] (94 folds)
  3. 2257050Fold g.3: Knottins (small inhibitors, toxins, lectins) [57015] (19 superfamilies)
    disulfide-bound fold; contains beta-hairpin with two adjacent disulfides
  4. 2257965Superfamily g.3.9: Growth factor receptor domain [57184] (2 families) (S)
  5. 2258033Family g.3.9.0: automated matches [232406] (1 protein)
    not a true family
  6. 2258034Protein automated matches [232407] (2 species)
    not a true protein

Species:

  1. 2258035Human (Homo sapiens) [TaxId:9606] [232408] (11 PDB entries)
    1. Domains for 2hr7:
      1. 2258036Domain d2hr7a2: 2hr7 A:157-311 [242061]
        Other proteins in same PDB: d2hr7a1, d2hr7a3, d2hr7b1, d2hr7b3
        automated match to d2dtge6
        complexed with gol, nag, p33, so4
      2. 2258037Domain d2hr7b2: 2hr7 B:157-311 [242064]
        Other proteins in same PDB: d2hr7a1, d2hr7a3, d2hr7b1, d2hr7b3
        automated match to d2dtge6
        complexed with gol, nag, p33, so4
    2. Domains for 3b2u:
      1. 2258045Domain d3b2ua2: 3b2u A:481-502 [154771]
        Other proteins in same PDB: d3b2ua1, d3b2ua3, d3b2ub1, d3b2ub3, d3b2uc1, d3b2uc2, d3b2ud1, d3b2ud2, d3b2ue1, d3b2ue3, d3b2uf1, d3b2uf2, d3b2ug1, d3b2ug2, d3b2uh1, d3b2uh2, d3b2ui1, d3b2ui3, d3b2uj1, d3b2uj2, d3b2uk1, d3b2uk2, d3b2ul1, d3b2ul2, d3b2um1, d3b2um3, d3b2un1, d3b2un2, d3b2uo1, d3b2uo2, d3b2up1, d3b2up3, d3b2uq1, d3b2uq2, d3b2ur1, d3b2ur2, d3b2us1, d3b2us3, d3b2ut1, d3b2ut2, d3b2uu1, d3b2uu2, d3b2uv1, d3b2uv3, d3b2uw1, d3b2uw2, d3b2ux1, d3b2ux2
        automated match to d4krla2
        complexed with nag, so4
      2. 2258046Domain d3b2ub2: 3b2u B:481-502 [154773]
        Other proteins in same PDB: d3b2ua1, d3b2ua3, d3b2ub1, d3b2ub3, d3b2uc1, d3b2uc2, d3b2ud1, d3b2ud2, d3b2ue1, d3b2ue3, d3b2uf1, d3b2uf2, d3b2ug1, d3b2ug2, d3b2uh1, d3b2uh2, d3b2ui1, d3b2ui3, d3b2uj1, d3b2uj2, d3b2uk1, d3b2uk2, d3b2ul1, d3b2ul2, d3b2um1, d3b2um3, d3b2un1, d3b2un2, d3b2uo1, d3b2uo2, d3b2up1, d3b2up3, d3b2uq1, d3b2uq2, d3b2ur1, d3b2ur2, d3b2us1, d3b2us3, d3b2ut1, d3b2ut2, d3b2uu1, d3b2uu2, d3b2uv1, d3b2uv3, d3b2uw1, d3b2uw2, d3b2ux1, d3b2ux2
        automated match to d4krla2
        complexed with nag, so4
      3. 2258047Domain d3b2ue2: 3b2u E:481-502 [154777]
        Other proteins in same PDB: d3b2ua1, d3b2ua3, d3b2ub1, d3b2ub3, d3b2uc1, d3b2uc2, d3b2ud1, d3b2ud2, d3b2ue1, d3b2ue3, d3b2uf1, d3b2uf2, d3b2ug1, d3b2ug2, d3b2uh1, d3b2uh2, d3b2ui1, d3b2ui3, d3b2uj1, d3b2uj2, d3b2uk1, d3b2uk2, d3b2ul1, d3b2ul2, d3b2um1, d3b2um3, d3b2un1, d3b2un2, d3b2uo1, d3b2uo2, d3b2up1, d3b2up3, d3b2uq1, d3b2uq2, d3b2ur1, d3b2ur2, d3b2us1, d3b2us3, d3b2ut1, d3b2ut2, d3b2uu1, d3b2uu2, d3b2uv1, d3b2uv3, d3b2uw1, d3b2uw2, d3b2ux1, d3b2ux2
        automated match to d4krla2
        complexed with nag, so4
      4. 2258048Domain d3b2ui2: 3b2u I:481-502 [154783]
        Other proteins in same PDB: d3b2ua1, d3b2ua3, d3b2ub1, d3b2ub3, d3b2uc1, d3b2uc2, d3b2ud1, d3b2ud2, d3b2ue1, d3b2ue3, d3b2uf1, d3b2uf2, d3b2ug1, d3b2ug2, d3b2uh1, d3b2uh2, d3b2ui1, d3b2ui3, d3b2uj1, d3b2uj2, d3b2uk1, d3b2uk2, d3b2ul1, d3b2ul2, d3b2um1, d3b2um3, d3b2un1, d3b2un2, d3b2uo1, d3b2uo2, d3b2up1, d3b2up3, d3b2uq1, d3b2uq2, d3b2ur1, d3b2ur2, d3b2us1, d3b2us3, d3b2ut1, d3b2ut2, d3b2uu1, d3b2uu2, d3b2uv1, d3b2uv3, d3b2uw1, d3b2uw2, d3b2ux1, d3b2ux2
        automated match to d4krla2
        complexed with nag, so4
      5. 2258049Domain d3b2um2: 3b2u M:481-502 [154787]
        Other proteins in same PDB: d3b2ua1, d3b2ua3, d3b2ub1, d3b2ub3, d3b2uc1, d3b2uc2, d3b2ud1, d3b2ud2, d3b2ue1, d3b2ue3, d3b2uf1, d3b2uf2, d3b2ug1, d3b2ug2, d3b2uh1, d3b2uh2, d3b2ui1, d3b2ui3, d3b2uj1, d3b2uj2, d3b2uk1, d3b2uk2, d3b2ul1, d3b2ul2, d3b2um1, d3b2um3, d3b2un1, d3b2un2, d3b2uo1, d3b2uo2, d3b2up1, d3b2up3, d3b2uq1, d3b2uq2, d3b2ur1, d3b2ur2, d3b2us1, d3b2us3, d3b2ut1, d3b2ut2, d3b2uu1, d3b2uu2, d3b2uv1, d3b2uv3, d3b2uw1, d3b2uw2, d3b2ux1, d3b2ux2
        automated match to d4krla2
        complexed with nag, so4
      6. 2258050Domain d3b2up2: 3b2u P:481-502 [154791]
        Other proteins in same PDB: d3b2ua1, d3b2ua3, d3b2ub1, d3b2ub3, d3b2uc1, d3b2uc2, d3b2ud1, d3b2ud2, d3b2ue1, d3b2ue3, d3b2uf1, d3b2uf2, d3b2ug1, d3b2ug2, d3b2uh1, d3b2uh2, d3b2ui1, d3b2ui3, d3b2uj1, d3b2uj2, d3b2uk1, d3b2uk2, d3b2ul1, d3b2ul2, d3b2um1, d3b2um3, d3b2un1, d3b2un2, d3b2uo1, d3b2uo2, d3b2up1, d3b2up3, d3b2uq1, d3b2uq2, d3b2ur1, d3b2ur2, d3b2us1, d3b2us3, d3b2ut1, d3b2ut2, d3b2uu1, d3b2uu2, d3b2uv1, d3b2uv3, d3b2uw1, d3b2uw2, d3b2ux1, d3b2ux2
        automated match to d4krla2
        complexed with nag, so4
      7. 2258051Domain d3b2us2: 3b2u S:481-502 [154795]
        Other proteins in same PDB: d3b2ua1, d3b2ua3, d3b2ub1, d3b2ub3, d3b2uc1, d3b2uc2, d3b2ud1, d3b2ud2, d3b2ue1, d3b2ue3, d3b2uf1, d3b2uf2, d3b2ug1, d3b2ug2, d3b2uh1, d3b2uh2, d3b2ui1, d3b2ui3, d3b2uj1, d3b2uj2, d3b2uk1, d3b2uk2, d3b2ul1, d3b2ul2, d3b2um1, d3b2um3, d3b2un1, d3b2un2, d3b2uo1, d3b2uo2, d3b2up1, d3b2up3, d3b2uq1, d3b2uq2, d3b2ur1, d3b2ur2, d3b2us1, d3b2us3, d3b2ut1, d3b2ut2, d3b2uu1, d3b2uu2, d3b2uv1, d3b2uv3, d3b2uw1, d3b2uw2, d3b2ux1, d3b2ux2
        automated match to d4krla2
        complexed with nag, so4
      8. 2258052Domain d3b2uv2: 3b2u V:481-502 [154799]
        Other proteins in same PDB: d3b2ua1, d3b2ua3, d3b2ub1, d3b2ub3, d3b2uc1, d3b2uc2, d3b2ud1, d3b2ud2, d3b2ue1, d3b2ue3, d3b2uf1, d3b2uf2, d3b2ug1, d3b2ug2, d3b2uh1, d3b2uh2, d3b2ui1, d3b2ui3, d3b2uj1, d3b2uj2, d3b2uk1, d3b2uk2, d3b2ul1, d3b2ul2, d3b2um1, d3b2um3, d3b2un1, d3b2un2, d3b2uo1, d3b2uo2, d3b2up1, d3b2up3, d3b2uq1, d3b2uq2, d3b2ur1, d3b2ur2, d3b2us1, d3b2us3, d3b2ut1, d3b2ut2, d3b2uu1, d3b2uu2, d3b2uv1, d3b2uv3, d3b2uw1, d3b2uw2, d3b2ux1, d3b2ux2
        automated match to d4krla2
        complexed with nag, so4
    3. Domains for 3be1:
      1. 2258056Domain d3be1a2: 3be1 A:165-321 [239158]
        Other proteins in same PDB: d3be1a1, d3be1a3, d3be1l1, d3be1l2
        automated match to d1n8yc3
        complexed with mes, nag
      2. 2258057Domain d3be1a4: 3be1 A:488-607 [239160]
        Other proteins in same PDB: d3be1a1, d3be1a3, d3be1l1, d3be1l2
        automated match to d1n8yc4
        complexed with mes, nag
    4. Domains for 3h3b:
      1. 2258038Domain d3h3ba2: 3h3b A:166-192 [232414]
        Other proteins in same PDB: d3h3ba1, d3h3ba3, d3h3bb1, d3h3bb3, d3h3bc1, d3h3bc2, d3h3bd1, d3h3bd2
        automated match to d1n8zc3
      2. 2258039Domain d3h3bb2: 3h3b B:166-191 [232410]
        Other proteins in same PDB: d3h3ba1, d3h3ba3, d3h3bb1, d3h3bb3, d3h3bc1, d3h3bc2, d3h3bd1, d3h3bd2
        automated match to d1n8zc3
    5. Domain for 3u7u:
    6. Domain for 4krl:
    7. Domains for 4krm:
      1. 2258040Domain d4krma2: 4krm A:481-503 [240445]
        Other proteins in same PDB: d4krma1, d4krma3, d4krmb_, d4krmc1, d4krmc3, d4krmd_, d4krme1, d4krme3, d4krmf_, d4krmg1, d4krmg2, d4krmh_, d4krmi1, d4krmi3, d4krmj_, d4krmk1, d4krmk3, d4krml_
        automated match to d4krla2
        complexed with nag
      2. 2258041Domain d4krmc2: 4krm C:481-503 [240447]
        Other proteins in same PDB: d4krma1, d4krma3, d4krmb_, d4krmc1, d4krmc3, d4krmd_, d4krme1, d4krme3, d4krmf_, d4krmg1, d4krmg2, d4krmh_, d4krmi1, d4krmi3, d4krmj_, d4krmk1, d4krmk3, d4krml_
        automated match to d4krla2
        complexed with nag
      3. 2258042Domain d4krme2: 4krm E:481-503 [240449]
        Other proteins in same PDB: d4krma1, d4krma3, d4krmb_, d4krmc1, d4krmc3, d4krmd_, d4krme1, d4krme3, d4krmf_, d4krmg1, d4krmg2, d4krmh_, d4krmi1, d4krmi3, d4krmj_, d4krmk1, d4krmk3, d4krml_
        automated match to d4krla2
        complexed with nag
      4. 2258043Domain d4krmi2: 4krm I:481-501 [240452]
        Other proteins in same PDB: d4krma1, d4krma3, d4krmb_, d4krmc1, d4krmc3, d4krmd_, d4krme1, d4krme3, d4krmf_, d4krmg1, d4krmg2, d4krmh_, d4krmi1, d4krmi3, d4krmj_, d4krmk1, d4krmk3, d4krml_
        automated match to d4krla2
        complexed with nag
      5. 2258044Domain d4krmk2: 4krm K:481-502 [240454]
        Other proteins in same PDB: d4krma1, d4krma3, d4krmb_, d4krmc1, d4krmc3, d4krmd_, d4krme1, d4krme3, d4krmf_, d4krmg1, d4krmg2, d4krmh_, d4krmi1, d4krmi3, d4krmj_, d4krmk1, d4krmk3, d4krml_
        automated match to d4krla2
        complexed with nag
    8. Domain for 5my6:
    9. Domains for 5sx4:
      1. 2258063Domain d5sx4m2: 5sx4 M:481-501 [323815]
        Other proteins in same PDB: d5sx4i1, d5sx4i2, d5sx4m1, d5sx4m3, d5sx4n1, d5sx4n3
        automated match to d3p0ya2
        complexed with 1pe, edo, gol, so4
      2. 2258064Domain d5sx4n2: 5sx4 N:481-501 [323726]
        Other proteins in same PDB: d5sx4i1, d5sx4i2, d5sx4m1, d5sx4m3, d5sx4n1, d5sx4n3
        automated match to d3p0ya2
        complexed with 1pe, edo, gol, so4
    10. Domains for 5sx5:
      1. 2258058Domain d5sx5m2: 5sx5 M:481-501 [323776]
        Other proteins in same PDB: d5sx5k1, d5sx5k2, d5sx5l1, d5sx5l2, d5sx5m1, d5sx5m3, d5sx5m4, d5sx5n1, d5sx5n3
        automated match to d3p0ya2
        complexed with 1pe, edo, gol, so4; mutant
      2. 2258059Domain d5sx5n2: 5sx5 N:481-501 [323797]
        Other proteins in same PDB: d5sx5k1, d5sx5k2, d5sx5l1, d5sx5l2, d5sx5m1, d5sx5m3, d5sx5m4, d5sx5n1, d5sx5n3
        automated match to d3p0ya2
        complexed with 1pe, edo, gol, so4; mutant
    11. Domains for 6b3s:
      1. 2258060Domain d6b3sb2: 6b3s B:481-502 [342233]
        Other proteins in same PDB: d6b3sa1, d6b3sa2, d6b3sb1, d6b3sb3, d6b3sd1, d6b3sd2, d6b3se1, d6b3se3, d6b3sg1, d6b3sg2, d6b3si1, d6b3si3, d6b3sk1, d6b3sk2, d6b3sl1, d6b3sl2
        automated match to d1yy9a4
        complexed with bma, man, nag
      2. 2258061Domain d6b3se2: 6b3s E:481-502 [342393]
        Other proteins in same PDB: d6b3sa1, d6b3sa2, d6b3sb1, d6b3sb3, d6b3sd1, d6b3sd2, d6b3se1, d6b3se3, d6b3sg1, d6b3sg2, d6b3si1, d6b3si3, d6b3sk1, d6b3sk2, d6b3sl1, d6b3sl2
        automated match to d1yy9a4
        complexed with bma, man, nag
      3. 2258062Domain d6b3si2: 6b3s I:481-502 [342232]
        Other proteins in same PDB: d6b3sa1, d6b3sa2, d6b3sb1, d6b3sb3, d6b3sd1, d6b3sd2, d6b3se1, d6b3se3, d6b3sg1, d6b3sg2, d6b3si1, d6b3si3, d6b3sk1, d6b3sk2, d6b3sl1, d6b3sl2
        automated match to d1yy9a4
        complexed with bma, man, nag
  2. 2258065Xenopus (Silurana) tropicalis [TaxId:8364] [311364] (1 PDB entry)

More info for Protein automated matches from g.3.9.0: automated matches

Timeline for Protein automated matches from g.3.9.0: automated matches: