SCOPe 2.03: Species: Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId: 11698]

Lineage for Species: Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId: 11698]

Root: SCOPe 2.03
Class a: All alpha proteins [46456] (284 folds)
Fold a.28: Acyl carrier protein-like [47335] (3 superfamilies)
4 helices, bundle; helix 3 is shorter than others; up-and-down
Superfamily a.28.3: Retrovirus capsid dimerization domain-like [47353] (3 families)
Family a.28.3.0: automated matches [191629] (1 protein)
not a true family
Protein automated matches [191156] (5 species)
not a true protein
Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] [232387] (2 PDB entries)

PDB entries in Species: Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId: 11698]:

Domain(s) for 3h47:
- Domain d3h47a2: 3h47 A:148-219 [232390]
  Other proteins in same PDB: d3h47a1
  automated match to d1e6jp1
Domain(s) for 3h4e:
1. Domain d3h4ea2: 3h4e A:148-220 [232400]
  Other proteins in same PDB: d3h4ea1, d3h4eb1, d3h4ec1, d3h4ed1, d3h4ee1, d3h4ef1, d3h4eg1, d3h4eh1, d3h4ei1, d3h4ej1
  automated match to d1e6jp1
2. Domain d3h4eb2: 3h4e B:148-219 [232394]
  Other proteins in same PDB: d3h4ea1, d3h4eb1, d3h4ec1, d3h4ed1, d3h4ee1, d3h4ef1, d3h4eg1, d3h4eh1, d3h4ei1, d3h4ej1
  automated match to d1e6jp1
3. Domain d3h4ec2: 3h4e C:148-219 [232403]
  Other proteins in same PDB: d3h4ea1, d3h4eb1, d3h4ec1, d3h4ed1, d3h4ee1, d3h4ef1, d3h4eg1, d3h4eh1, d3h4ei1, d3h4ej1
  automated match to d1e6jp1
4. Domain d3h4ed2: 3h4e D:148-219 [232398]
  Other proteins in same PDB: d3h4ea1, d3h4eb1, d3h4ec1, d3h4ed1, d3h4ee1, d3h4ef1, d3h4eg1, d3h4eh1, d3h4ei1, d3h4ej1
  automated match to d1e6jp1
5. Domain d3h4ee2: 3h4e E:148-219 [232391]
  Other proteins in same PDB: d3h4ea1, d3h4eb1, d3h4ec1, d3h4ed1, d3h4ee1, d3h4ef1, d3h4eg1, d3h4eh1, d3h4ei1, d3h4ej1
  automated match to d1e6jp1
6. Domain d3h4ef2: 3h4e F:148-219 [232402]
  Other proteins in same PDB: d3h4ea1, d3h4eb1, d3h4ec1, d3h4ed1, d3h4ee1, d3h4ef1, d3h4eg1, d3h4eh1, d3h4ei1, d3h4ej1
  automated match to d1e6jp1
7. Domain d3h4eg2: 3h4e G:148-220 [232401]
  Other proteins in same PDB: d3h4ea1, d3h4eb1, d3h4ec1, d3h4ed1, d3h4ee1, d3h4ef1, d3h4eg1, d3h4eh1, d3h4ei1, d3h4ej1
  automated match to d1e6jp1
8. Domain d3h4eh2: 3h4e H:148-219 [232397]
  Other proteins in same PDB: d3h4ea1, d3h4eb1, d3h4ec1, d3h4ed1, d3h4ee1, d3h4ef1, d3h4eg1, d3h4eh1, d3h4ei1, d3h4ej1
  automated match to d1e6jp1
9. Domain d3h4ei2: 3h4e I:148-219 [232396]
  Other proteins in same PDB: d3h4ea1, d3h4eb1, d3h4ec1, d3h4ed1, d3h4ee1, d3h4ef1, d3h4eg1, d3h4eh1, d3h4ei1, d3h4ej1
  automated match to d1e6jp1
10. Domain d3h4ej2: 3h4e J:148-219 [232393]
  Other proteins in same PDB: d3h4ea1, d3h4eb1, d3h4ec1, d3h4ed1, d3h4ee1, d3h4ef1, d3h4eg1, d3h4eh1, d3h4ei1, d3h4ej1
  automated match to d1e6jp1

More info for Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] from a.28.3.0 automated matches

Timeline for Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] from a.28.3.0 automated matches:

Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] from a.28.3.0 automated matches is new in SCOPe 2.03-stable
Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] from a.28.3.0 automated matches appears in SCOPe 2.04
Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] from a.28.3.0 automated matches appears in the current release, SCOPe 2.08