Lineage for d3h47a1 (3h47 A:1-147)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2000631Fold a.73: Retrovirus capsid protein, N-terminal core domain [47942] (1 superfamily)
    core: 5 helices; bundle
  4. 2000632Superfamily a.73.1: Retrovirus capsid protein, N-terminal core domain [47943] (2 families) (S)
  5. 2000633Family a.73.1.1: Retrovirus capsid protein, N-terminal core domain [47944] (6 protein domains)
  6. 2000764Protein automated matches [190369] (6 species)
    not a true protein
  7. 2000780Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] [232370] (2 PDB entries)
  8. 2000781Domain d3h47a1: 3h47 A:1-147 [232371]
    Other proteins in same PDB: d3h47a2
    automated match to d1e6jp2

Details for d3h47a1

PDB Entry: 3h47 (more details), 1.9 Å

PDB Description: X-ray Structure of Hexameric HIV-1 CA
PDB Compounds: (A:) capsid protein p24

SCOPe Domain Sequences for d3h47a1:

Sequence, based on SEQRES records: (download)

>d3h47a1 a.73.1.1 (A:1-147) automated matches {Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId: 11698]}
pivqnlqgqmvhqcisprtlnawvkvveekafspevipmfsalscgatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmysp

Sequence, based on observed residues (ATOM records): (download)

>d3h47a1 a.73.1.1 (A:1-147) automated matches {Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId: 11698]}
pivqnqmvhqcisprtlnawvkvveekafspevipmfsalscgatpqdlntmlntvgghq
aamqmlketineeaaewdrlhpvhiapgqmreprgsdiagttstlqeqigwmthnppipv
geiykrwiilglnkivrmysp

SCOPe Domain Coordinates for d3h47a1:

Click to download the PDB-style file with coordinates for d3h47a1.
(The format of our PDB-style files is described here.)

Timeline for d3h47a1:

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Domains from same chain:
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d3h47a2