Lineage for d3arba1 (3arb A:6-185)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2163004Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
    dimeric
  4. 2163005Superfamily d.19.1: MHC antigen-recognition domain [54452] (2 families) (S)
  5. 2163006Family d.19.1.1: MHC antigen-recognition domain [54453] (13 protein domains)
  6. 2163007Protein CD1, alpha-1 and alpha-2 domains [54456] (5 species)
    Class I MHC-related
  7. 2163048Species Mouse (Mus musculus) [TaxId:10090] [54457] (25 PDB entries)
  8. 2163067Domain d3arba1: 3arb A:6-185 [231808]
    Other proteins in same PDB: d3arba2, d3arba3, d3arbb_, d3arbc1, d3arbc2, d3arbd1, d3arbd2
    automated match to d3area1
    complexed with d12, fee, nag, peg

Details for d3arba1

PDB Entry: 3arb (more details), 2.7 Å

PDB Description: Ternary crystal structure of the NKT TCR-CD1d-alpha-galactosylceramide analogue-OCH
PDB Compounds: (A:) Antigen-presenting glycoprotein CD1d1

SCOPe Domain Sequences for d3arba1:

Sequence, based on SEQRES records: (download)

>d3arba1 d.19.1.1 (A:6-185) CD1, alpha-1 and alpha-2 domains {Mouse (Mus musculus) [TaxId: 10090]}
knytfrclqmssfanrswsrtdsvvwlgdlqthrwsndsatisftkpwsqgklsnqqwek
lqhmfqvyrvsftrdiqelvkmmspkedypieiqlsagcemypgnasesflhvafqgkyv
vrfwgtswqtvpgapswldlpikvlnadqgtsatvqmllndtcplfvrglleagksdlek

Sequence, based on observed residues (ATOM records): (download)

>d3arba1 d.19.1.1 (A:6-185) CD1, alpha-1 and alpha-2 domains {Mouse (Mus musculus) [TaxId: 10090]}
knytfrclqmssfanrswsrtdsvvwlgdlqthrwsndsatisftkpwsqgklsnqqwek
lqhmfqvyrvsftrdiqelvkmmspdypieiqlsagcemypgnasesflhvafqgkyvvr
fwgtswqtvpgapswldlpikvlnadqgtsatvqmllndtcplfvrglleagksdlek

SCOPe Domain Coordinates for d3arba1:

Click to download the PDB-style file with coordinates for d3arba1.
(The format of our PDB-style files is described here.)

Timeline for d3arba1: