Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2081496Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2083606Family c.1.8.11: Putative alpha-L-fucosidase, catalytic domain [102079] (2 protein domains)
    glycosyl hydrolase family 29; contains additional beta-barrel with a topological similarity to the C-terminal domain of alpha amylases
    automatically mapped to Pfam PF01120
  6. 2083615Protein automated matches [231482] (2 species)
    not a true protein

Species:

  1. 2083616Thermotoga maritima [TaxId:2336] [231744] (10 PDB entries)
    1. Domains for 2zwy:
      1. 2083633Domain d2zwya1: 2zwy A:7-356 [231752]
        Other proteins in same PDB: d2zwya2, d2zwyb2
        automated match to d1hl9a2
      2. 2083634Domain d2zwyb1: 2zwy B:7-356 [231745]
        Other proteins in same PDB: d2zwya2, d2zwyb2
        automated match to d1hl9a2
    2. Domains for 2zwz:
      1. 2083619Domain d2zwza1: 2zwz A:7-356 [231748]
        Other proteins in same PDB: d2zwza2, d2zwzb2
        automated match to d1hl9a2
        complexed with zwz
      2. 2083620Domain d2zwzb1: 2zwz B:7-356 [231750]
        Other proteins in same PDB: d2zwza2, d2zwzb2
        automated match to d1hl9a2
        complexed with zwz
    3. Domains for 2zx5:
      1. 2083635Domain d2zx5a1: 2zx5 A:7-356 [245016]
        Other proteins in same PDB: d2zx5a2, d2zx5b2
        automated match to d2zwyb1
        complexed with zx5
      2. 2083636Domain d2zx5b1: 2zx5 B:7-356 [245018]
        Other proteins in same PDB: d2zx5a2, d2zx5b2
        automated match to d2zwyb1
        complexed with zx5
    4. Domains for 2zx6:
      1. 2083623Domain d2zx6a1: 2zx6 A:7-356 [245020]
        Other proteins in same PDB: d2zx6a2, d2zx6b2
        automated match to d2zwyb1
        complexed with zx6
      2. 2083624Domain d2zx6b1: 2zx6 B:7-356 [245022]
        Other proteins in same PDB: d2zx6a2, d2zx6b2
        automated match to d2zwyb1
        complexed with zx6
    5. Domains for 2zx7:
      1. 2083625Domain d2zx7a1: 2zx7 A:7-356 [245024]
        Other proteins in same PDB: d2zx7a2, d2zx7b2
        automated match to d2zwyb1
        complexed with zx7
      2. 2083626Domain d2zx7b1: 2zx7 B:7-356 [245026]
        Other proteins in same PDB: d2zx7a2, d2zx7b2
        automated match to d2zwyb1
        complexed with zx7
    6. Domains for 2zx8:
      1. 2083621Domain d2zx8a1: 2zx8 A:7-356 [245028]
        Other proteins in same PDB: d2zx8a2, d2zx8b2
        automated match to d2zwyb1
        complexed with zx8
      2. 2083622Domain d2zx8b1: 2zx8 B:7-356 [245030]
        Other proteins in same PDB: d2zx8a2, d2zx8b2
        automated match to d2zwyb1
        complexed with zx8
    7. Domains for 2zx9:
      1. 2083629Domain d2zx9a1: 2zx9 A:7-356 [245032]
        Other proteins in same PDB: d2zx9a2, d2zx9b2
        automated match to d2zwyb1
        complexed with zx9
      2. 2083630Domain d2zx9b1: 2zx9 B:7-356 [245034]
        Other proteins in same PDB: d2zx9a2, d2zx9b2
        automated match to d2zwyb1
        complexed with zx9
    8. Domains for 2zxa:
      1. 2083627Domain d2zxaa1: 2zxa A:7-356 [245036]
        Other proteins in same PDB: d2zxaa2, d2zxab2
        automated match to d2zwyb1
        complexed with zxa
      2. 2083628Domain d2zxab1: 2zxa B:7-356 [245038]
        Other proteins in same PDB: d2zxaa2, d2zxab2
        automated match to d2zwyb1
        complexed with zxa
    9. Domains for 2zxb:
      1. 2083631Domain d2zxba1: 2zxb A:7-356 [245040]
        Other proteins in same PDB: d2zxba2, d2zxbb2
        automated match to d2zwyb1
        complexed with zxb
      2. 2083632Domain d2zxbb1: 2zxb B:7-356 [245042]
        Other proteins in same PDB: d2zxba2, d2zxbb2
        automated match to d2zwyb1
        complexed with zxb
    10. Domains for 2zxd:
      1. 2083617Domain d2zxda1: 2zxd A:7-356 [245044]
        Other proteins in same PDB: d2zxda2, d2zxdb2
        automated match to d2zwyb1
        complexed with zxd
      2. 2083618Domain d2zxdb1: 2zxd B:7-356 [245046]
        Other proteins in same PDB: d2zxda2, d2zxdb2
        automated match to d2zwyb1
        complexed with zxd
  2. 2083637Thermotoga maritima [TaxId:243274] [231483] (1 PDB entry)

More info for Protein automated matches from c.1.8.11: Putative alpha-L-fucosidase, catalytic domain

Timeline for Protein automated matches from c.1.8.11: Putative alpha-L-fucosidase, catalytic domain: