Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2158219Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2159798Superfamily d.15.4: 2Fe-2S ferredoxin-like [54292] (3 families) (S)
  5. 2159971Family d.15.4.2: 2Fe-2S ferredoxin domains from multidomain proteins [54312] (14 protein domains)
  6. 2160134Protein automated matches [231466] (4 species)
    not a true protein

Species:

  1. 2160135Cow (Bos taurus) [TaxId:9913] [232069] (10 PDB entries)
    1. Domains for 3etr:
      1. 2160150Domain d3etra1: 3etr A:2-92 [232072]
        Other proteins in same PDB: d3etra2, d3etrb1, d3etrb2, d3etrc1, d3etrc2, d3etrl2, d3etrm1, d3etrm2, d3etrn1, d3etrn2
        automated match to d3etrl1
        complexed with ca, fad, fes, luz, mos, mte
      2. 2160151Domain d3etrl1: 3etr L:2-92 [232073]
        Other proteins in same PDB: d3etra2, d3etrb1, d3etrb2, d3etrc1, d3etrc2, d3etrl2, d3etrm1, d3etrm2, d3etrn1, d3etrn2
        automated match to d1fiqa2
        complexed with ca, fad, fes, luz, mos, mte
    2. Domains for 3eub:
      1. 2160154Domain d3eub21: 3eub 2:2-92 [232078]
        Other proteins in same PDB: d3eub22, d3eub31, d3eub32, d3eub41, d3eub42, d3euba2, d3eubb1, d3eubb2, d3eubc1, d3eubc2, d3eubj2, d3eubk1, d3eubk2, d3eubl1, d3eubl2, d3eubs2, d3eubt1, d3eubt2, d3eubu1, d3eubu2
        automated match to d1fiqa2
        complexed with fad, fes, mom, mte, xan
      2. 2160155Domain d3euba1: 3eub A:4-92 [232081]
        Other proteins in same PDB: d3eub22, d3eub31, d3eub32, d3eub41, d3eub42, d3euba2, d3eubb1, d3eubb2, d3eubc1, d3eubc2, d3eubj2, d3eubk1, d3eubk2, d3eubl1, d3eubl2, d3eubs2, d3eubt1, d3eubt2, d3eubu1, d3eubu2
        automated match to d1fiqa2
        complexed with fad, fes, mom, mte, xan
      3. 2160156Domain d3eubj1: 3eub J:4-92 [239252]
        Other proteins in same PDB: d3eub22, d3eub31, d3eub32, d3eub41, d3eub42, d3euba2, d3eubb1, d3eubb2, d3eubc1, d3eubc2, d3eubj2, d3eubk1, d3eubk2, d3eubl1, d3eubl2, d3eubs2, d3eubt1, d3eubt2, d3eubu1, d3eubu2
        automated match to d3euba1
        complexed with fad, fes, mom, mte, xan
      4. 2160157Domain d3eubs1: 3eub S:3-92 [239258]
        Other proteins in same PDB: d3eub22, d3eub31, d3eub32, d3eub41, d3eub42, d3euba2, d3eubb1, d3eubb2, d3eubc1, d3eubc2, d3eubj2, d3eubk1, d3eubk2, d3eubl1, d3eubl2, d3eubs2, d3eubt1, d3eubt2, d3eubu1, d3eubu2
        automated match to d3eub21
        complexed with fad, fes, mom, mte, xan
    3. Domains for 3nrz:
      1. 2160140Domain d3nrza1: 3nrz A:2-92 [239499]
        Other proteins in same PDB: d3nrza2, d3nrzb1, d3nrzb2, d3nrzc1, d3nrzc2, d3nrzj2, d3nrzk1, d3nrzk2, d3nrzl1, d3nrzl2
        automated match to d3etrl1
        complexed with fad, fes, hpa, mos, mte
      2. 2160141Domain d3nrzj1: 3nrz J:2-92 [239503]
        Other proteins in same PDB: d3nrza2, d3nrzb1, d3nrzb2, d3nrzc1, d3nrzc2, d3nrzj2, d3nrzk1, d3nrzk2, d3nrzl1, d3nrzl2
        automated match to d3etrl1
        complexed with fad, fes, hpa, mos, mte
    4. Domains for 3ns1:
      1. 2160152Domain d3ns1a1: 3ns1 A:2-92 [248001]
        Other proteins in same PDB: d3ns1a2, d3ns1b1, d3ns1b2, d3ns1c1, d3ns1c2, d3ns1j2, d3ns1k1, d3ns1k2, d3ns1l1, d3ns1l2
        automated match to d3etrl1
        complexed with fad, fes, mos, mte, pm6
      2. 2160153Domain d3ns1j1: 3ns1 J:2-92 [248007]
        Other proteins in same PDB: d3ns1a2, d3ns1b1, d3ns1b2, d3ns1c1, d3ns1c2, d3ns1j2, d3ns1k1, d3ns1k2, d3ns1l1, d3ns1l2
        automated match to d3etrl1
        complexed with fad, fes, mos, mte, pm6
    5. Domains for 3nvv:
      1. 2160138Domain d3nvva1: 3nvv A:2-92 [239507]
        Other proteins in same PDB: d3nvva2, d3nvvb1, d3nvvb2, d3nvvc1, d3nvvc2, d3nvvj2, d3nvvk1, d3nvvk2, d3nvvl1, d3nvvl2
        automated match to d3etrl1
        complexed with ast, fad, fes, mos, mte
      2. 2160139Domain d3nvvj1: 3nvv J:2-92 [239511]
        Other proteins in same PDB: d3nvva2, d3nvvb1, d3nvvb2, d3nvvc1, d3nvvc2, d3nvvj2, d3nvvk1, d3nvvk2, d3nvvl1, d3nvvl2
        automated match to d3etrl1
        complexed with ast, fad, fes, mos, mte
    6. Domains for 3nvw:
      1. 2160136Domain d3nvwa1: 3nvw A:2-92 [248041]
        Other proteins in same PDB: d3nvwa2, d3nvwb1, d3nvwb2, d3nvwc1, d3nvwc2, d3nvwj2, d3nvwk1, d3nvwk2, d3nvwl1, d3nvwl2
        automated match to d3etrl1
        complexed with fad, fes, gun, mos, mte
      2. 2160137Domain d3nvwj1: 3nvw J:2-92 [248047]
        Other proteins in same PDB: d3nvwa2, d3nvwb1, d3nvwb2, d3nvwc1, d3nvwc2, d3nvwj2, d3nvwk1, d3nvwk2, d3nvwl1, d3nvwl2
        automated match to d3etrl1
        complexed with fad, fes, gun, mos, mte
    7. Domains for 3nvy:
      1. 2160148Domain d3nvya1: 3nvy A:2-92 [248053]
        Other proteins in same PDB: d3nvya2, d3nvyb1, d3nvyb2, d3nvyc1, d3nvyc2, d3nvyj2, d3nvyk1, d3nvyk2, d3nvyl1, d3nvyl2
        automated match to d3etrl1
        complexed with fad, fes, mos, mte, que
      2. 2160149Domain d3nvyj1: 3nvy J:2-92 [248059]
        Other proteins in same PDB: d3nvya2, d3nvyb1, d3nvyb2, d3nvyc1, d3nvyc2, d3nvyj2, d3nvyk1, d3nvyk2, d3nvyl1, d3nvyl2
        automated match to d3etrl1
        complexed with fad, fes, mos, mte, que
    8. Domains for 3nvz:
      1. 2160142Domain d3nvza1: 3nvz A:2-92 [248065]
        Other proteins in same PDB: d3nvza2, d3nvzb1, d3nvzb2, d3nvzc1, d3nvzc2, d3nvzj2, d3nvzk1, d3nvzk2, d3nvzl1, d3nvzl2
        automated match to d3etrl1
        complexed with fad, fes, i3a, mos, mte
      2. 2160143Domain d3nvzj1: 3nvz J:2-92 [248071]
        Other proteins in same PDB: d3nvza2, d3nvzb1, d3nvzb2, d3nvzc1, d3nvzc2, d3nvzj2, d3nvzk1, d3nvzk2, d3nvzl1, d3nvzl2
        automated match to d3etrl1
        complexed with fad, fes, i3a, mos, mte
    9. Domains for 3rca:
      1. 2160146Domain d3rcaa1: 3rca A:2-92 [306430]
        Other proteins in same PDB: d3rcaa2, d3rcab1, d3rcab2, d3rcac1, d3rcac2, d3rcaj2, d3rcak1, d3rcak2, d3rcal1, d3rcal2
        automated match to d3ax7a1
        complexed with fad, fes, mte, rmo
      2. 2160147Domain d3rcaj1: 3rca J:2-92 [306436]
        Other proteins in same PDB: d3rcaa2, d3rcab1, d3rcab2, d3rcac1, d3rcac2, d3rcaj2, d3rcak1, d3rcak2, d3rcal1, d3rcal2
        automated match to d3ax7a1
        complexed with fad, fes, mte, rmo
    10. Domains for 3sr6:
      1. 2160144Domain d3sr6a1: 3sr6 A:2-92 [239751]
        Other proteins in same PDB: d3sr6a2, d3sr6b1, d3sr6b2, d3sr6c1, d3sr6c2, d3sr6j2, d3sr6k1, d3sr6k2, d3sr6l1, d3sr6l2
        automated match to d3etrl1
        complexed with fad, fes, mte, rmo
      2. 2160145Domain d3sr6j1: 3sr6 J:2-92 [239755]
        Other proteins in same PDB: d3sr6a2, d3sr6b1, d3sr6b2, d3sr6c1, d3sr6c2, d3sr6j2, d3sr6k1, d3sr6k2, d3sr6l1, d3sr6l2
        automated match to d3etrl1
        complexed with fad, fes, mte, rmo
  2. 2160158Escherichia coli [TaxId:216592] [256013] (2 PDB entries)
    1. Domains for 3p4r:
      1. 2160159Domain d3p4rb1: 3p4r B:1-105 [248414]
        Other proteins in same PDB: d3p4rb2, d3p4rc_, d3p4rn2, d3p4ro_
        automated match to d3p4pb1
        complexed with f3s, fad, fes, gua, sf4
      2. 2160160Domain d3p4rn1: 3p4r N:1-105 [248417]
        Other proteins in same PDB: d3p4rb2, d3p4rc_, d3p4rn2, d3p4ro_
        automated match to d3p4pb1
        complexed with f3s, fad, fes, gua, sf4
    2. Domains for 3p4s:
      1. 2160161Domain d3p4sb1: 3p4s B:1-105 [248420]
        Other proteins in same PDB: d3p4sb2, d3p4sc_, d3p4sn2, d3p4so_
        automated match to d3p4pb1
        complexed with 3np, f3s, fad, fes, sf4
      2. 2160162Domain d3p4sn1: 3p4s N:1-105 [248423]
        Other proteins in same PDB: d3p4sb2, d3p4sc_, d3p4sn2, d3p4so_
        automated match to d3p4pb1
        complexed with 3np, f3s, fad, fes, sf4
  3. 2160163Escherichia coli [TaxId:562] [231467] (2 PDB entries)
    1. Domain for 2acz:
    2. Domains for 2wp9:
      1. 2160164Domain d2wp9b1: 2wp9 B:1-106 [231468]
        Other proteins in same PDB: d2wp9a1, d2wp9a2, d2wp9a3, d2wp9b2, d2wp9c_, d2wp9d_, d2wp9e1, d2wp9e2, d2wp9e3, d2wp9f2, d2wp9g_, d2wp9h_, d2wp9i1, d2wp9i2, d2wp9i3, d2wp9j2, d2wp9k_, d2wp9l_
        automated match to d1nekb2
        complexed with cbe, f3s, fad, fes, hem, na, sf4, teo; mutant
      2. 2160165Domain d2wp9f1: 2wp9 F:1-106 [238974]
        Other proteins in same PDB: d2wp9a1, d2wp9a2, d2wp9a3, d2wp9b2, d2wp9c_, d2wp9d_, d2wp9e1, d2wp9e2, d2wp9e3, d2wp9f2, d2wp9g_, d2wp9h_, d2wp9i1, d2wp9i2, d2wp9i3, d2wp9j2, d2wp9k_, d2wp9l_
        automated match to d2wp9b1
        complexed with cbe, f3s, fad, fes, hem, na, sf4, teo; mutant
      3. 2160166Domain d2wp9j1: 2wp9 J:1-106 [238976]
        Other proteins in same PDB: d2wp9a1, d2wp9a2, d2wp9a3, d2wp9b2, d2wp9c_, d2wp9d_, d2wp9e1, d2wp9e2, d2wp9e3, d2wp9f2, d2wp9g_, d2wp9h_, d2wp9i1, d2wp9i2, d2wp9i3, d2wp9j2, d2wp9k_, d2wp9l_
        automated match to d2wp9b1
        complexed with cbe, f3s, fad, fes, hem, na, sf4, teo; mutant
  4. 2160168Wolinella succinogenes [TaxId:844] [255061] (1 PDB entry)

More info for Protein automated matches from d.15.4.2: 2Fe-2S ferredoxin domains from multidomain proteins

Timeline for Protein automated matches from d.15.4.2: 2Fe-2S ferredoxin domains from multidomain proteins: