SCOPe 2.07: Domain d2v4ra1: 2v4r A:2-241

Lineage for d2v4ra1 (2v4r A:2-241)

1. Root: SCOPe 2.07

2. Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)

3. Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
   divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members

4. Superfamily e.8.1: DNA/RNA polymerases [56672] (8 families)
   "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain

5. Family e.8.1.7: Lesion bypass DNA polymerase (Y-family), catalytic domain [100888] (5 proteins)
   contains a distinct 'fingers' domain possibly related to the C-terminal subdomain of hypothetical protein Ta1206 (1qw2)

6. Protein automated matches [231300] (5 species)
   not a true protein

7. Species Sulfolobus solfataricus [TaxId:273057] [231301] (28 PDB entries)

8. Domain d2v4ra1: 2v4r A:2-241 [231302]
   Other proteins in same PDB: d2v4ra2, d2v4ra3
   automated match to d1jx4a2
   protein/DNA complex; complexed with ca, dgt

Details for d2v4ra1

PDB Entry: 2v4r, 2.5 Å

PDB Description: non-productive complex of the y-family dna polymerase dpo4 with dgtp skipping the m1dg adduct to pair with the next template cytosine

PDB Compounds: (A:) DNA polymerase IV

SCOPe Domain Sequences for d2v4ra1:

Sequence; same for both SEQRES and ATOM records:

>d2v4ra1 e.8.1.7 (A:2-241) automated matches {Sulfolobus solfataricus [TaxId: 273057]}
mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagip
iveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyre
aynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldi
advpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtr

Timeline for d2v4ra1:

• d2v4ra1 first appeared in SCOPe 2.03
  
• d2v4ra1 appears in SCOPe 2.06
  
• d2v4ra1 appears in the current release, SCOPe 2.08