Lineage for Species: Sea lamprey (Petromyzon marinus) [TaxId: 7757]

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2435068Fold c.10: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) [52046] (3 superfamilies)
    2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies
  4. 2435137Superfamily c.10.2: L domain-like [52058] (9 families) (S)
    less regular structure consisting of variable repeats
  5. 2435341Family c.10.2.0: automated matches [191489] (1 protein)
    not a true family
  6. 2435342Protein automated matches [190787] (11 species)
    not a true protein
  7. 2435399Species Sea lamprey (Petromyzon marinus) [TaxId:7757] [231246] (9 PDB entries)

PDB entries in Species: Sea lamprey (Petromyzon marinus) [TaxId: 7757]:

  1. Domain(s) for 2r9u:
    1. 2435410Domain d2r9ua1: 2r9u A:22-190 [231247]
      Other proteins in same PDB: d2r9ua2, d2r9ub2, d2r9uc2, d2r9ud2
      automated match to d2o6ra_
    2. 2435411Domain d2r9ub1: 2r9u B:22-190 [231248]
      Other proteins in same PDB: d2r9ua2, d2r9ub2, d2r9uc2, d2r9ud2
      automated match to d2o6ra_
    3. 2435412Domain d2r9uc1: 2r9u C:22-190 [231249]
      Other proteins in same PDB: d2r9ua2, d2r9ub2, d2r9uc2, d2r9ud2
      automated match to d2o6ra_
    4. 2435413Domain d2r9ud1: 2r9u D:22-190 [231250]
      Other proteins in same PDB: d2r9ua2, d2r9ub2, d2r9uc2, d2r9ud2
      automated match to d2o6ra_
  2. Domain(s) for 3e6j:
  3. Domain(s) for 3g39:
  4. Domain(s) for 3g3a:
    1. 2435414Domain d3g3aa_: 3g3a A: [232233]
      Other proteins in same PDB: d3g3ab_, d3g3ad_, d3g3af_, d3g3ah_
      automated match to d2o6ra_
    2. 2435415Domain d3g3ac_: 3g3a C: [232234]
      Other proteins in same PDB: d3g3ab_, d3g3ad_, d3g3af_, d3g3ah_
      automated match to d2o6ra_
    3. 2435416Domain d3g3ae_: 3g3a E: [232235]
      Other proteins in same PDB: d3g3ab_, d3g3ad_, d3g3af_, d3g3ah_
      automated match to d2o6ra_
    4. 2435417Domain d3g3ag_: 3g3a G: [239291]
      Other proteins in same PDB: d3g3ab_, d3g3ad_, d3g3af_, d3g3ah_
      automated match to d3g3aa_
  5. Domain(s) for 3g3b:
    1. 2435421Domain d3g3ba_: 3g3b A: [232236]
      Other proteins in same PDB: d3g3bb_, d3g3bd_, d3g3bf_, d3g3bh_
      automated match to d2o6ra_
      mutant
    2. 2435422Domain d3g3bc_: 3g3b C: [232237]
      Other proteins in same PDB: d3g3bb_, d3g3bd_, d3g3bf_, d3g3bh_
      automated match to d2o6ra_
      mutant
    3. 2435423Domain d3g3be_: 3g3b E: [239292]
      Other proteins in same PDB: d3g3bb_, d3g3bd_, d3g3bf_, d3g3bh_
      automated match to d3g3ba_
      mutant
  6. Domain(s) for 3twi:
    1. 2435418Domain d3twid_: 3twi D: [233750]
      automated match to d2o6ra_
      complexed with gol
    2. 2435419Domain d3twie1: 3twi E:21-185 [233752]
      automated match to d2o6ra_
      complexed with gol
    3. 2435420Domain d3twif_: 3twi F: [233751]
      automated match to d2o6ra_
      complexed with gol
  7. Domain(s) for 5ufd:
    1. 2435408Domain d5ufda_: 5ufd A: [345855]
      automated match to d5wk4e_
      complexed with mg
    2. 2435409Domain d5ufdb_: 5ufd B: [345856]
      automated match to d5wk4e_
      complexed with mg
  8. Domain(s) for 5uff:
  9. Domain(s) for 5wk4:
    1. 2435402Domain d5wk4a_: 5wk4 A: [342906]
      automated match to d2o6ra_
      complexed with mg
    2. 2435403Domain d5wk4b_: 5wk4 B: [342923]
      automated match to d2o6ra_
      complexed with mg
    3. 2435404Domain d5wk4c_: 5wk4 C: [342937]
      automated match to d2o6ra_
      complexed with mg
    4. 2435405Domain d5wk4d_: 5wk4 D: [342920]
      automated match to d2o6ra_
      complexed with mg
    5. 2435406Domain d5wk4e_: 5wk4 E: [342932]
      automated match to d2o6ra_
      complexed with mg
    6. 2435407Domain d5wk4f_: 5wk4 F: [342868]
      automated match to d2o6ra_
      complexed with mg

More info for Species Sea lamprey (Petromyzon marinus) [TaxId:7757] from c.10.2.0 automated matches

Timeline for Species Sea lamprey (Petromyzon marinus) [TaxId:7757] from c.10.2.0 automated matches: