Lineage for d2oogd1 (2oog D:44-309)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2413227Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2425148Superfamily c.1.18: PLC-like phosphodiesterases [51695] (4 families) (S)
  5. 2425231Family c.1.18.0: automated matches [191539] (1 protein)
    not a true family
  6. 2425232Protein automated matches [190919] (11 species)
    not a true protein
  7. 2425263Species Staphylococcus aureus [TaxId:158879] [231089] (2 PDB entries)
  8. 2425267Domain d2oogd1: 2oog D:44-309 [231093]
    Other proteins in same PDB: d2ooga2, d2oogb2, d2oogc2, d2oogd2, d2ooge2, d2oogf2
    automated match to d3ch0a_
    complexed with gol, so4, zn

Details for d2oogd1

PDB Entry: 2oog (more details), 2.2 Å

PDB Description: Crystal structure of glycerophosphoryl diester phosphodiesterase from Staphylococcus aureus
PDB Compounds: (D:) Glycerophosphoryl diester phosphodiesterase

SCOPe Domain Sequences for d2oogd1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2oogd1 c.1.18.0 (D:44-309) automated matches {Staphylococcus aureus [TaxId: 158879]}

SCOPe Domain Coordinates for d2oogd1:

Click to download the PDB-style file with coordinates for d2oogd1.
(The format of our PDB-style files is described here.)

Timeline for d2oogd1: