SCOPe 2.08: Domain d2d5vb1: 2d5v B:1-79

Lineage for d2d5vb1 (2d5v B:1-79)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.35: lambda repressor-like DNA-binding domains [47412] (1 superfamily)
   core: 4 helices; folded leaf, closed

4. Superfamily a.35.1: lambda repressor-like DNA-binding domains [47413] (14 families)

5. Family a.35.1.7: CUT domain [116891] (5 proteins)
   Pfam PF02376

6. Protein automated matches [190367] (2 species)
   not a true protein

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [230635] (1 PDB entry)

8. Domain d2d5vb1: 2d5v B:1-79 [230639]
   Other proteins in same PDB: d2d5va2, d2d5vb2
   automated match to d1s7ea2
   protein/DNA complex; complexed with act, gol

Details for d2d5vb1

PDB Entry: 2d5v, 2 Å

PDB Description: Crystal structure of HNF-6alpha DNA-binding domain in complex with the TTR promoter

PDB Compounds: (B:) Hepatocyte nuclear factor 6

SCOPe Domain Sequences for d2d5vb1:

Sequence; same for both SEQRES and ATOM records:

>d2d5vb1 a.35.1.7 (B:1-79) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
meeintkevaqrittelkrysipqaifaqrvlcrsqgtlsdllrnpkpwsklksgretfr
rmwkwlqepefqrmsalrl

Timeline for d2d5vb1:

• d2d5vb1 first appeared in SCOPe 2.03
  
• d2d5vb1 appears in SCOPe 2.07