Lineage for d2d5va1 (2d5v A:1-79)

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2709316Fold a.35: lambda repressor-like DNA-binding domains [47412] (1 superfamily)
    core: 4 helices; folded leaf, closed
  4. 2709317Superfamily a.35.1: lambda repressor-like DNA-binding domains [47413] (14 families) (S)
  5. 2709677Family a.35.1.7: CUT domain [116891] (5 proteins)
    Pfam PF02376
  6. 2709693Protein automated matches [190367] (2 species)
    not a true protein
  7. 2709697Species Norway rat (Rattus norvegicus) [TaxId:10116] [230635] (1 PDB entry)
  8. 2709698Domain d2d5va1: 2d5v A:1-79 [230636]
    Other proteins in same PDB: d2d5va2, d2d5vb2
    automated match to d1s7ea2
    protein/DNA complex; complexed with act, gol

Details for d2d5va1

PDB Entry: 2d5v (more details), 2 Å

PDB Description: Crystal structure of HNF-6alpha DNA-binding domain in complex with the TTR promoter
PDB Compounds: (A:) Hepatocyte nuclear factor 6

SCOPe Domain Sequences for d2d5va1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2d5va1 a.35.1.7 (A:1-79) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}

SCOPe Domain Coordinates for d2d5va1:

Click to download the PDB-style file with coordinates for d2d5va1.
(The format of our PDB-style files is described here.)

Timeline for d2d5va1:

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