SCOPe 2.08: Domain d1zxnd2: 1zxn D:266-425

Lineage for d1zxnd2 (1zxn D:266-425)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.14: Ribosomal protein S5 domain 2-like [54210] (1 superfamily)
   core: beta(3)-alpha-beta-alpha; 2 layers: alpha/beta; left-handed crossover

4. Superfamily d.14.1: Ribosomal protein S5 domain 2-like [54211] (13 families)

5. Family d.14.1.0: automated matches [191504] (1 protein)
   not a true family

6. Protein automated matches [190826] (23 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [189350] (13 PDB entries)

8. Domain d1zxnd2: 1zxn D:266-425 [230478]
   Other proteins in same PDB: d1zxna1, d1zxnb1, d1zxnc1, d1zxnd1
   automated match to d1zxmb2
   complexed with adp, gol, mg, so4

Details for d1zxnd2

PDB Entry: 1zxn, 2.51 Å

PDB Description: Human DNA topoisomerase IIa ATPase/ADP

PDB Compounds: (D:) DNA topoisomerase II, alpha isozyme

SCOPe Domain Sequences for d1zxnd2:

Sequence, based on SEQRES records:

>d1zxnd2 d.14.1.0 (D:266-425) automated matches {Human (Homo sapiens) [TaxId: 9606]}
gfrsyvdmylkdkldetgnslkviheqvnhrwevcltmsekgfqqisfvnsiatskggrh
vdyvadqivtklvdvvkkknkggvavkahqvknhmwifvnalienptfdsqtkenmtlqp
ksfgstcqlsekfikaaigcgivesilnwvkfkaqvqlnk

Sequence, based on observed residues (ATOM records):

>d1zxnd2 d.14.1.0 (D:266-425) automated matches {Human (Homo sapiens) [TaxId: 9606]}
gfrsyvdmylkkviheqvnhrwevcltmsekgfqqisfvnsiatskggrhvdyvadqivt
klvdvvkkahqvknhmwifvnalienptfdtkenmtlqpksfgstcqlsekfikaaigcg
ivwvkfkaqvqlnk

Timeline for d1zxnd2:

• d1zxnd2 first appeared in SCOPe 2.03
  
• d1zxnd2 appears in SCOPe 2.07