Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2168779Fold d.41: alpha/beta-Hammerhead [54664] (5 superfamilies)
    core: beta-BETA-alpha-beta-BETA-beta-alpha; contains a beta-hammerhead motif similar to that in barrel-sandwich hybrids
  4. 2168780Superfamily d.41.1: CO dehydrogenase molybdoprotein N-domain-like [54665] (2 families) (S)
  5. 2168866Family d.41.1.0: automated matches [230464] (1 protein)
    not a true family
  6. 2168867Protein automated matches [230465] (4 species)
    not a true protein

Species:

  1. 2168868Cow (Bos taurus) [TaxId:9913] [232071] (10 PDB entries)
    1. Domains for 3etr:
      1. 2168883Domain d3etrc1: 3etr C:571-694 [232075]
        Other proteins in same PDB: d3etra1, d3etra2, d3etrb1, d3etrb2, d3etrc2, d3etrl1, d3etrl2, d3etrm1, d3etrm2, d3etrn2
        automated match to d1v97a3
        complexed with ca, fad, fes, luz, mos, mte
      2. 2168884Domain d3etrn1: 3etr N:571-694 [232077]
        Other proteins in same PDB: d3etra1, d3etra2, d3etrb1, d3etrb2, d3etrc2, d3etrl1, d3etrl2, d3etrm1, d3etrm2, d3etrn2
        automated match to d3etrc1
        complexed with ca, fad, fes, luz, mos, mte
    2. Domains for 3eub:
      1. 2168887Domain d3eub41: 3eub 4:571-694 [232080]
        Other proteins in same PDB: d3eub21, d3eub22, d3eub31, d3eub32, d3eub42, d3euba1, d3euba2, d3eubb1, d3eubb2, d3eubc2, d3eubj1, d3eubj2, d3eubk1, d3eubk2, d3eubl2, d3eubs1, d3eubs2, d3eubt1, d3eubt2, d3eubu2
        automated match to d1v97a3
        complexed with fad, fes, mom, mte, xan
      2. 2168888Domain d3eubc1: 3eub C:572-694 [232083]
        Other proteins in same PDB: d3eub21, d3eub22, d3eub31, d3eub32, d3eub42, d3euba1, d3euba2, d3eubb1, d3eubb2, d3eubc2, d3eubj1, d3eubj2, d3eubk1, d3eubk2, d3eubl2, d3eubs1, d3eubs2, d3eubt1, d3eubt2, d3eubu2
        automated match to d1v97a3
        complexed with fad, fes, mom, mte, xan
      3. 2168889Domain d3eubl1: 3eub L:571-694 [239256]
        Other proteins in same PDB: d3eub21, d3eub22, d3eub31, d3eub32, d3eub42, d3euba1, d3euba2, d3eubb1, d3eubb2, d3eubc2, d3eubj1, d3eubj2, d3eubk1, d3eubk2, d3eubl2, d3eubs1, d3eubs2, d3eubt1, d3eubt2, d3eubu2
        automated match to d3eub41
        complexed with fad, fes, mom, mte, xan
      4. 2168890Domain d3eubu1: 3eub U:571-694 [239262]
        Other proteins in same PDB: d3eub21, d3eub22, d3eub31, d3eub32, d3eub42, d3euba1, d3euba2, d3eubb1, d3eubb2, d3eubc2, d3eubj1, d3eubj2, d3eubk1, d3eubk2, d3eubl2, d3eubs1, d3eubs2, d3eubt1, d3eubt2, d3eubu2
        automated match to d3eub41
        complexed with fad, fes, mom, mte, xan
    3. Domains for 3nrz:
      1. 2168873Domain d3nrzc1: 3nrz C:571-694 [233038]
        Other proteins in same PDB: d3nrza1, d3nrza2, d3nrzb1, d3nrzb2, d3nrzc2, d3nrzj1, d3nrzj2, d3nrzk1, d3nrzk2, d3nrzl2
        automated match to d1v97a3
        complexed with fad, fes, hpa, mos, mte
      2. 2168874Domain d3nrzl1: 3nrz L:571-694 [233040]
        Other proteins in same PDB: d3nrza1, d3nrza2, d3nrzb1, d3nrzb2, d3nrzc2, d3nrzj1, d3nrzj2, d3nrzk1, d3nrzk2, d3nrzl2
        automated match to d1v97a3
        complexed with fad, fes, hpa, mos, mte
    4. Domains for 3ns1:
      1. 2168885Domain d3ns1c1: 3ns1 C:571-694 [248005]
        Other proteins in same PDB: d3ns1a1, d3ns1a2, d3ns1b1, d3ns1b2, d3ns1c2, d3ns1j1, d3ns1j2, d3ns1k1, d3ns1k2, d3ns1l2
        automated match to d3etrc1
        complexed with fad, fes, mos, mte, pm6
      2. 2168886Domain d3ns1l1: 3ns1 L:571-694 [248011]
        Other proteins in same PDB: d3ns1a1, d3ns1a2, d3ns1b1, d3ns1b2, d3ns1c2, d3ns1j1, d3ns1j2, d3ns1k1, d3ns1k2, d3ns1l2
        automated match to d3etrc1
        complexed with fad, fes, mos, mte, pm6
    5. Domains for 3nvv:
      1. 2168871Domain d3nvvc1: 3nvv C:571-694 [239509]
        Other proteins in same PDB: d3nvva1, d3nvva2, d3nvvb1, d3nvvb2, d3nvvc2, d3nvvj1, d3nvvj2, d3nvvk1, d3nvvk2, d3nvvl2
        automated match to d3etrc1
        complexed with ast, fad, fes, mos, mte
      2. 2168872Domain d3nvvl1: 3nvv L:571-694 [239515]
        Other proteins in same PDB: d3nvva1, d3nvva2, d3nvvb1, d3nvvb2, d3nvvc2, d3nvvj1, d3nvvj2, d3nvvk1, d3nvvk2, d3nvvl2
        automated match to d3etrc1
        complexed with ast, fad, fes, mos, mte
    6. Domains for 3nvw:
      1. 2168869Domain d3nvwc1: 3nvw C:571-694 [248045]
        Other proteins in same PDB: d3nvwa1, d3nvwa2, d3nvwb1, d3nvwb2, d3nvwc2, d3nvwj1, d3nvwj2, d3nvwk1, d3nvwk2, d3nvwl2
        automated match to d3nrzc1
        complexed with fad, fes, gun, mos, mte
      2. 2168870Domain d3nvwl1: 3nvw L:571-694 [248051]
        Other proteins in same PDB: d3nvwa1, d3nvwa2, d3nvwb1, d3nvwb2, d3nvwc2, d3nvwj1, d3nvwj2, d3nvwk1, d3nvwk2, d3nvwl2
        automated match to d3nrzc1
        complexed with fad, fes, gun, mos, mte
    7. Domains for 3nvy:
      1. 2168881Domain d3nvyc1: 3nvy C:571-694 [248057]
        Other proteins in same PDB: d3nvya1, d3nvya2, d3nvyb1, d3nvyb2, d3nvyc2, d3nvyj1, d3nvyj2, d3nvyk1, d3nvyk2, d3nvyl2
        automated match to d3nrzc1
        complexed with fad, fes, mos, mte, que
      2. 2168882Domain d3nvyl1: 3nvy L:571-694 [248063]
        Other proteins in same PDB: d3nvya1, d3nvya2, d3nvyb1, d3nvyb2, d3nvyc2, d3nvyj1, d3nvyj2, d3nvyk1, d3nvyk2, d3nvyl2
        automated match to d3nrzc1
        complexed with fad, fes, mos, mte, que
    8. Domains for 3nvz:
      1. 2168875Domain d3nvzc1: 3nvz C:571-694 [248069]
        Other proteins in same PDB: d3nvza1, d3nvza2, d3nvzb1, d3nvzb2, d3nvzc2, d3nvzj1, d3nvzj2, d3nvzk1, d3nvzk2, d3nvzl2
        automated match to d3etrc1
        complexed with fad, fes, i3a, mos, mte
      2. 2168876Domain d3nvzl1: 3nvz L:571-694 [248075]
        Other proteins in same PDB: d3nvza1, d3nvza2, d3nvzb1, d3nvzb2, d3nvzc2, d3nvzj1, d3nvzj2, d3nvzk1, d3nvzk2, d3nvzl2
        automated match to d3etrc1
        complexed with fad, fes, i3a, mos, mte
    9. Domains for 3rca:
      1. 2168879Domain d3rcac1: 3rca C:571-694 [306434]
        Other proteins in same PDB: d3rcaa1, d3rcaa2, d3rcab1, d3rcab2, d3rcac2, d3rcaj1, d3rcaj2, d3rcak1, d3rcak2, d3rcal2
        automated match to d3b9jc1
        complexed with fad, fes, mte, rmo
      2. 2168880Domain d3rcal1: 3rca L:571-694 [306440]
        Other proteins in same PDB: d3rcaa1, d3rcaa2, d3rcab1, d3rcab2, d3rcac2, d3rcaj1, d3rcaj2, d3rcak1, d3rcak2, d3rcal2
        automated match to d3b9jc1
        complexed with fad, fes, mte, rmo
    10. Domains for 3sr6:
      1. 2168877Domain d3sr6c1: 3sr6 C:571-694 [233613]
        Other proteins in same PDB: d3sr6a1, d3sr6a2, d3sr6b1, d3sr6b2, d3sr6c2, d3sr6j1, d3sr6j2, d3sr6k1, d3sr6k2, d3sr6l2
        automated match to d1v97a3
        complexed with fad, fes, mte, rmo
      2. 2168878Domain d3sr6l1: 3sr6 L:571-694 [233615]
        Other proteins in same PDB: d3sr6a1, d3sr6a2, d3sr6b1, d3sr6b2, d3sr6c2, d3sr6j1, d3sr6j2, d3sr6k1, d3sr6k2, d3sr6l2
        automated match to d1v97a3
        complexed with fad, fes, mte, rmo
  2. 2168891Desulfovibrio gigas [TaxId:879] [311146] (1 PDB entry)
  3. 2168893Oligotropha carboxidovorans [TaxId:504832] [230466] (1 PDB entry)
  4. 2168896Pseudomonas carboxydovorans [311171] (1 PDB entry)

More info for Protein automated matches from d.41.1.0: automated matches

Timeline for Protein automated matches from d.41.1.0: automated matches: