Lineage for d1vtob1 (1vto B:1011-1106)

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1431002Fold d.129: TBP-like [55944] (11 superfamilies)
    beta-alpha-beta(4)-alpha
  4. 1431003Superfamily d.129.1: TATA-box binding protein-like [55945] (3 families) (S)
  5. 1431182Family d.129.1.0: automated matches [227265] (1 protein)
    not a true family
  6. 1431183Protein automated matches [227057] (3 species)
    not a true protein
  7. 1431184Species Arabidopsis thaliana [TaxId:3702] [230343] (2 PDB entries)
  8. 1431187Domain d1vtob1: 1vto B:1011-1106 [230350]
    automated match to d1mp9a1
    protein/DNA complex

Details for d1vtob1

PDB Entry: 1vto (more details), 1.9 Å

PDB Description: 1.9 a resolution refined structure of tbp recognizing the minor groove of tataaaag
PDB Compounds: (B:) tata binding protein

SCOPe Domain Sequences for d1vtob1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1vtob1 d.129.1.0 (B:1011-1106) automated matches {Arabidopsis thaliana [TaxId: 3702]}
pvdlskhpsgivptlqnivstvnldckldlkaialqarnaeynpkrfaavimrirepktt
alifasgkmvctgaksedfskmaarkyarivqklgf

SCOPe Domain Coordinates for d1vtob1:

Click to download the PDB-style file with coordinates for d1vtob1.
(The format of our PDB-style files is described here.)

Timeline for d1vtob1:

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Domains from same chain:
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d1vtob2