Lineage for Species: Porphyromonas gingivalis [TaxId: 431947]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2125386Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
    core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
  4. 2125403Superfamily c.56.2: Purine and uridine phosphorylases [53167] (2 families) (S)
    complex architecture; contains mixed beta-sheet of 8 strands, order 23415867, strands 3, 6 & 7 are antiparallel to the rest; and barrel, closed; n=5, S=8
  5. 2126300Family c.56.2.0: automated matches [191488] (1 protein)
    not a true family
  6. 2126301Protein automated matches [190781] (41 species)
    not a true protein
  7. 2126491Species Porphyromonas gingivalis [TaxId:431947] [230181] (2 PDB entries)

PDB entries in Species: Porphyromonas gingivalis [TaxId: 431947]:

  1. Domain(s) for 4ns1:
    1. 2126495Domain d4ns1a_: 4ns1 A: [235822]
      Other proteins in same PDB: d4ns1b2, d4ns1d2
      automated match to d4ns1b_
      complexed with da, gol, so4
    2. 2126496Domain d4ns1b1: 4ns1 B:16-288 [230182]
      Other proteins in same PDB: d4ns1b2, d4ns1d2
      automated match to d1lvuc_
      complexed with da, gol, so4
    3. 2126497Domain d4ns1c_: 4ns1 C: [235820]
      Other proteins in same PDB: d4ns1b2, d4ns1d2
      automated match to d4ns1b_
      complexed with da, gol, so4
    4. 2126498Domain d4ns1d1: 4ns1 D:16-288 [235821]
      Other proteins in same PDB: d4ns1b2, d4ns1d2
      automated match to d4ns1b_
      complexed with da, gol, so4
  2. Domain(s) for 4nsn:
    1. 2126492Domain d4nsna_: 4nsn A: [235826]
      automated match to d4ns1b_
      complexed with ade, so4
    2. 2126493Domain d4nsnb_: 4nsn B: [235823]
      automated match to d4ns1b_
      complexed with ade, so4
    3. 2126494Domain d4nsnc_: 4nsn C: [235827]
      automated match to d4ns1b_
      complexed with ade, so4

More info for Species Porphyromonas gingivalis [TaxId:431947] from c.56.2.0 automated matches

Timeline for Species Porphyromonas gingivalis [TaxId:431947] from c.56.2.0 automated matches: