Lineage for d4mdke1 (4mdk E:0-74)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2931196Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2931197Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2931198Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2931514Protein Ubiquitin [54238] (9 species)
  7. 2931628Species Human (Homo sapiens) [TaxId:9606] [54239] (312 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 2932022Domain d4mdke1: 4mdk E:0-74 [229684]
    Other proteins in same PDB: d4mdka_, d4mdkb_, d4mdkc_, d4mdkd_, d4mdke2, d4mdkf2, d4mdkh2
    automated match to d4ap4f_
    complexed with u94

Details for d4mdke1

PDB Entry: 4mdk (more details), 2.61 Å

PDB Description: Cdc34-ubiquitin-CC0651 complex
PDB Compounds: (E:) Ubiquitin

SCOPe Domain Sequences for d4mdke1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4mdke1 d.15.1.1 (E:0-74) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
gmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdy
niqkestlhlvlrlr

SCOPe Domain Coordinates for d4mdke1:

Click to download the PDB-style file with coordinates for d4mdke1.
(The format of our PDB-style files is described here.)

Timeline for d4mdke1: