Lineage for d4l12a1 (4l12 A:2-230)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2939772Fold d.22: GFP-like [54510] (1 superfamily)
    beta-sheet folds into a barrel (n=11, S=14) around the central helix
  4. 2939773Superfamily d.22.1: GFP-like [54511] (3 families) (S)
  5. 2939774Family d.22.1.1: Fluorescent proteins [54512] (6 proteins)
  6. 2939778Protein Green fluorescent protein, GFP [54513] (6 species)
  7. 2939786Species Jellyfish (Aequorea victoria) [TaxId:6100] [54514] (285 PDB entries)
    Uniprot P42212
  8. 2939980Domain d4l12a1: 4l12 A:2-230 [229640]
    Other proteins in same PDB: d4l12a2, d4l12a3
    automated match to d3svca_
    complexed with gd

Details for d4l12a1

PDB Entry: 4l12 (more details), 1.78 Å

PDB Description: Crystal structure of EGFP-based Calcium Sensor CatchER complexed with Gd
PDB Compounds: (A:) EGFP-based Calcium Sensor CatchER

SCOPe Domain Sequences for d4l12a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4l12a1 d.22.1.1 (A:2-230) Green fluorescent protein, GFP {Jellyfish (Aequorea victoria) [TaxId: 6100]}
skgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlv
ttlgygvqcfsrypdhmkqhdffksampegyvqertiffkddgnyktraevkfegdtlvn
rielkgidfkedgnilghkleynynehnvyitadkqkngikanfkirhniedgsvqladh
yqqntpigdgpvllpdnhyldtesalskdpnekrdhmvlleeveaagit

SCOPe Domain Coordinates for d4l12a1:

Click to download the PDB-style file with coordinates for d4l12a1.
(The format of our PDB-style files is described here.)

Timeline for d4l12a1: