Lineage for Species: Human polyomavirus 9 [TaxId: 943908]

  1. Root: SCOPe 2.03
  2. 1287432Class b: All beta proteins [48724] (174 folds)
  3. 1334432Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 1335234Superfamily b.121.6: Group I dsDNA viruses [88648] (2 families) (S)
  5. 1335235Family b.121.6.1: Papovaviridae-like VP [88649] (3 proteins)
  6. 1335275Protein automated matches [191200] (3 species)
    not a true protein
  7. 1335282Species Human polyomavirus 9 [TaxId:943908] [229433] (4 PDB entries)

PDB entries in Species: Human polyomavirus 9 [TaxId: 943908]:

  1. Domain(s) for 4mbx:
    1. 1335303Domain d4mbxa_: 4mbx A: [235563]
      automated match to d4mbxe_
      complexed with ca, edo
    2. 1335304Domain d4mbxb_: 4mbx B: [235564]
      automated match to d4mbxe_
      complexed with ca, edo
    3. 1335305Domain d4mbxc_: 4mbx C: [235565]
      automated match to d4mbxe_
      complexed with ca, edo
    4. 1335306Domain d4mbxd_: 4mbx D: [229434]
      automated match to d1vpsb_
      complexed with ca, edo
    5. 1335307Domain d4mbxe_: 4mbx E: [229435]
      automated match to d1vpsb_
      complexed with ca, edo
    6. 1335308Domain d4mbxf_: 4mbx F: [229436]
      automated match to d1vpsb_
      complexed with ca, edo
    7. 1335309Domain d4mbxg_: 4mbx G: [235566]
      automated match to d4mbxd_
      complexed with ca, edo
    8. 1335310Domain d4mbxh_: 4mbx H: [235568]
      automated match to d4mbxd_
      complexed with ca, edo
    9. 1335311Domain d4mbxi_: 4mbx I: [235569]
      automated match to d4mbxd_
      complexed with ca, edo
    10. 1335312Domain d4mbxj_: 4mbx J: [235571]
      automated match to d4mbxe_
      complexed with ca, edo
  2. Domain(s) for 4mby:
    1. 1335283Domain d4mbya_: 4mby A: [235570]
      automated match to d4mbxe_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    2. 1335284Domain d4mbyb_: 4mby B: [235573]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    3. 1335285Domain d4mbyc_: 4mby C: [235574]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    4. 1335286Domain d4mbyd_: 4mby D: [235572]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    5. 1335287Domain d4mbye_: 4mby E: [235576]
      automated match to d4mbxe_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    6. 1335288Domain d4mbyf_: 4mby F: [235575]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    7. 1335289Domain d4mbyg_: 4mby G: [235577]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    8. 1335290Domain d4mbyh_: 4mby H: [235579]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    9. 1335291Domain d4mbyi_: 4mby I: [235578]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    10. 1335292Domain d4mbyj_: 4mby J: [235580]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
  3. Domain(s) for 4mbz:
    1. 1335293Domain d4mbza_: 4mbz A: [235581]
      automated match to d4mbxe_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    2. 1335294Domain d4mbzb_: 4mbz B: [235582]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    3. 1335295Domain d4mbzc_: 4mbz C: [235583]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    4. 1335296Domain d4mbzd_: 4mbz D: [235584]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    5. 1335297Domain d4mbze_: 4mbz E: [235585]
      automated match to d4mbxe_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    6. 1335298Domain d4mbzf_: 4mbz F: [235587]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    7. 1335299Domain d4mbzg_: 4mbz G: [235586]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    8. 1335300Domain d4mbzh_: 4mbz H: [235588]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    9. 1335301Domain d4mbzi_: 4mbz I: [235590]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    10. 1335302Domain d4mbzj_: 4mbz J: [235589]
      automated match to d4mbxe_
      protein/DNA complex; complexed with ca, cl, edo, ipa
  4. Domain(s) for 4pos:

More info for Species Human polyomavirus 9 [TaxId:943908] from b.121.6.1 automated matches

Timeline for Species Human polyomavirus 9 [TaxId:943908] from b.121.6.1 automated matches: