Class b: All beta proteins [48724] (180 folds) |
Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies) sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies |
Superfamily b.121.6: Group I dsDNA viruses [88648] (2 families) |
Family b.121.6.1: Papovaviridae-like VP [88649] (3 proteins) |
Protein automated matches [191200] (13 species) not a true protein |
Species Human polyomavirus 9 [TaxId:943908] [229433] (7 PDB entries) |
Domain d4mbxa1: 4mbx A:29-301 [235563] Other proteins in same PDB: d4mbxa2, d4mbxb2, d4mbxc2, d4mbxd2, d4mbxe2, d4mbxf2, d4mbxg2, d4mbxh2, d4mbxi2, d4mbxj2 automated match to d4mbxe_ complexed with ca, edo |
Domain d4mbxb1: 4mbx B:29-300 [235564] Other proteins in same PDB: d4mbxa2, d4mbxb2, d4mbxc2, d4mbxd2, d4mbxe2, d4mbxf2, d4mbxg2, d4mbxh2, d4mbxi2, d4mbxj2 automated match to d4mbxe_ complexed with ca, edo |
Domain d4mbxc1: 4mbx C:29-300 [235565] Other proteins in same PDB: d4mbxa2, d4mbxb2, d4mbxc2, d4mbxd2, d4mbxe2, d4mbxf2, d4mbxg2, d4mbxh2, d4mbxi2, d4mbxj2 automated match to d4mbxe_ complexed with ca, edo |
Domain d4mbxd1: 4mbx D:29-299 [229434] Other proteins in same PDB: d4mbxa2, d4mbxb2, d4mbxc2, d4mbxd2, d4mbxe2, d4mbxf2, d4mbxg2, d4mbxh2, d4mbxi2, d4mbxj2 automated match to d1vpsb_ complexed with ca, edo |
Domain d4mbxe1: 4mbx E:29-301 [229435] Other proteins in same PDB: d4mbxa2, d4mbxb2, d4mbxc2, d4mbxd2, d4mbxe2, d4mbxf2, d4mbxg2, d4mbxh2, d4mbxi2, d4mbxj2 automated match to d1vpsb_ complexed with ca, edo |
Domain d4mbxf1: 4mbx F:29-298 [229436] Other proteins in same PDB: d4mbxa2, d4mbxb2, d4mbxc2, d4mbxd2, d4mbxe2, d4mbxf2, d4mbxg2, d4mbxh2, d4mbxi2, d4mbxj2 automated match to d1vpsb_ complexed with ca, edo |
Domain d4mbxg1: 4mbx G:29-297 [235566] Other proteins in same PDB: d4mbxa2, d4mbxb2, d4mbxc2, d4mbxd2, d4mbxe2, d4mbxf2, d4mbxg2, d4mbxh2, d4mbxi2, d4mbxj2 automated match to d4mbxd_ complexed with ca, edo |
Domain d4mbxh1: 4mbx H:29-298 [235568] Other proteins in same PDB: d4mbxa2, d4mbxb2, d4mbxc2, d4mbxd2, d4mbxe2, d4mbxf2, d4mbxg2, d4mbxh2, d4mbxi2, d4mbxj2 automated match to d4mbxd_ complexed with ca, edo |
Domain d4mbxi1: 4mbx I:29-299 [235569] Other proteins in same PDB: d4mbxa2, d4mbxb2, d4mbxc2, d4mbxd2, d4mbxe2, d4mbxf2, d4mbxg2, d4mbxh2, d4mbxi2, d4mbxj2 automated match to d4mbxd_ complexed with ca, edo |
Domain d4mbxj1: 4mbx J:29-300 [235571] Other proteins in same PDB: d4mbxa2, d4mbxb2, d4mbxc2, d4mbxd2, d4mbxe2, d4mbxf2, d4mbxg2, d4mbxh2, d4mbxi2, d4mbxj2 automated match to d4mbxe_ complexed with ca, edo |
Domain d4mbya1: 4mby A:29-301 [235570] Other proteins in same PDB: d4mbya2, d4mbyb2, d4mbyc2, d4mbyd2, d4mbye2, d4mbyf2, d4mbyg2, d4mbyh2, d4mbyi2, d4mbyj2 automated match to d4mbxe_ protein/DNA complex; complexed with ca, cl, edo, ipa |
Domain d4mbyb1: 4mby B:29-299 [235573] Other proteins in same PDB: d4mbya2, d4mbyb2, d4mbyc2, d4mbyd2, d4mbye2, d4mbyf2, d4mbyg2, d4mbyh2, d4mbyi2, d4mbyj2 automated match to d4mbxd_ protein/DNA complex; complexed with ca, cl, edo, ipa |
Domain d4mbyc1: 4mby C:29-299 [235574] Other proteins in same PDB: d4mbya2, d4mbyb2, d4mbyc2, d4mbyd2, d4mbye2, d4mbyf2, d4mbyg2, d4mbyh2, d4mbyi2, d4mbyj2 automated match to d4mbxd_ protein/DNA complex; complexed with ca, cl, edo, ipa |
Domain d4mbyd1: 4mby D:29-299 [235572] Other proteins in same PDB: d4mbya2, d4mbyb2, d4mbyc2, d4mbyd2, d4mbye2, d4mbyf2, d4mbyg2, d4mbyh2, d4mbyi2, d4mbyj2 automated match to d4mbxd_ protein/DNA complex; complexed with ca, cl, edo, ipa |
Domain d4mbye1: 4mby E:29-301 [235576] Other proteins in same PDB: d4mbya2, d4mbyb2, d4mbyc2, d4mbyd2, d4mbye2, d4mbyf2, d4mbyg2, d4mbyh2, d4mbyi2, d4mbyj2 automated match to d4mbxe_ protein/DNA complex; complexed with ca, cl, edo, ipa |
Domain d4mbyf1: 4mby F:29-298 [235575] Other proteins in same PDB: d4mbya2, d4mbyb2, d4mbyc2, d4mbyd2, d4mbye2, d4mbyf2, d4mbyg2, d4mbyh2, d4mbyi2, d4mbyj2 automated match to d4mbxd_ protein/DNA complex; complexed with ca, cl, edo, ipa |
Domain d4mbyg1: 4mby G:29-297 [235577] Other proteins in same PDB: d4mbya2, d4mbyb2, d4mbyc2, d4mbyd2, d4mbye2, d4mbyf2, d4mbyg2, d4mbyh2, d4mbyi2, d4mbyj2 automated match to d4mbxd_ protein/DNA complex; complexed with ca, cl, edo, ipa |
Domain d4mbyh1: 4mby H:29-298 [235579] Other proteins in same PDB: d4mbya2, d4mbyb2, d4mbyc2, d4mbyd2, d4mbye2, d4mbyf2, d4mbyg2, d4mbyh2, d4mbyi2, d4mbyj2 automated match to d4mbxd_ protein/DNA complex; complexed with ca, cl, edo, ipa |
Domain d4mbyi1: 4mby I:29-298 [235578] Other proteins in same PDB: d4mbya2, d4mbyb2, d4mbyc2, d4mbyd2, d4mbye2, d4mbyf2, d4mbyg2, d4mbyh2, d4mbyi2, d4mbyj2 automated match to d4mbxd_ protein/DNA complex; complexed with ca, cl, edo, ipa |
Domain d4mbyj1: 4mby J:29-299 [235580] Other proteins in same PDB: d4mbya2, d4mbyb2, d4mbyc2, d4mbyd2, d4mbye2, d4mbyf2, d4mbyg2, d4mbyh2, d4mbyi2, d4mbyj2 automated match to d4mbxd_ protein/DNA complex; complexed with ca, cl, edo, ipa |
Domain d4mbza1: 4mbz A:29-301 [235581] Other proteins in same PDB: d4mbza2, d4mbzb2, d4mbzc2, d4mbzd2, d4mbze2, d4mbzf2, d4mbzg2, d4mbzh2, d4mbzi2, d4mbzj2 automated match to d4mbxe_ protein/DNA complex; complexed with ca, cl, edo, ipa |
Domain d4mbzb1: 4mbz B:29-299 [235582] Other proteins in same PDB: d4mbza2, d4mbzb2, d4mbzc2, d4mbzd2, d4mbze2, d4mbzf2, d4mbzg2, d4mbzh2, d4mbzi2, d4mbzj2 automated match to d4mbxd_ protein/DNA complex; complexed with ca, cl, edo, ipa |
Domain d4mbzc1: 4mbz C:29-299 [235583] Other proteins in same PDB: d4mbza2, d4mbzb2, d4mbzc2, d4mbzd2, d4mbze2, d4mbzf2, d4mbzg2, d4mbzh2, d4mbzi2, d4mbzj2 automated match to d4mbxd_ protein/DNA complex; complexed with ca, cl, edo, ipa |
Domain d4mbzd1: 4mbz D:29-299 [235584] Other proteins in same PDB: d4mbza2, d4mbzb2, d4mbzc2, d4mbzd2, d4mbze2, d4mbzf2, d4mbzg2, d4mbzh2, d4mbzi2, d4mbzj2 automated match to d4mbxd_ protein/DNA complex; complexed with ca, cl, edo, ipa |
Domain d4mbze1: 4mbz E:29-301 [235585] Other proteins in same PDB: d4mbza2, d4mbzb2, d4mbzc2, d4mbzd2, d4mbze2, d4mbzf2, d4mbzg2, d4mbzh2, d4mbzi2, d4mbzj2 automated match to d4mbxe_ protein/DNA complex; complexed with ca, cl, edo, ipa |
Domain d4mbzf1: 4mbz F:29-298 [235587] Other proteins in same PDB: d4mbza2, d4mbzb2, d4mbzc2, d4mbzd2, d4mbze2, d4mbzf2, d4mbzg2, d4mbzh2, d4mbzi2, d4mbzj2 automated match to d4mbxd_ protein/DNA complex; complexed with ca, cl, edo, ipa |
Domain d4mbzg1: 4mbz G:29-298 [235586] Other proteins in same PDB: d4mbza2, d4mbzb2, d4mbzc2, d4mbzd2, d4mbze2, d4mbzf2, d4mbzg2, d4mbzh2, d4mbzi2, d4mbzj2 automated match to d4mbxd_ protein/DNA complex; complexed with ca, cl, edo, ipa |
Domain d4mbzh1: 4mbz H:29-298 [235588] Other proteins in same PDB: d4mbza2, d4mbzb2, d4mbzc2, d4mbzd2, d4mbze2, d4mbzf2, d4mbzg2, d4mbzh2, d4mbzi2, d4mbzj2 automated match to d4mbxd_ protein/DNA complex; complexed with ca, cl, edo, ipa |
Domain d4mbzi1: 4mbz I:29-299 [235590] Other proteins in same PDB: d4mbza2, d4mbzb2, d4mbzc2, d4mbzd2, d4mbze2, d4mbzf2, d4mbzg2, d4mbzh2, d4mbzi2, d4mbzj2 automated match to d4mbxd_ protein/DNA complex; complexed with ca, cl, edo, ipa |
Domain d4mbzj1: 4mbz J:29-300 [235589] Other proteins in same PDB: d4mbza2, d4mbzb2, d4mbzc2, d4mbzd2, d4mbze2, d4mbzf2, d4mbzg2, d4mbzh2, d4mbzi2, d4mbzj2 automated match to d4mbxe_ protein/DNA complex; complexed with ca, cl, edo, ipa |
Domain d4poqa_: 4poq A: [254069] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4poqb_: 4poq B: [254070] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4poqc_: 4poq C: [254071] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4poqd_: 4poq D: [254072] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4poqe_: 4poq E: [254073] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4poqf_: 4poq F: [254074] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4poqg_: 4poq G: [254075] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4poqh_: 4poq H: [254076] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4poqi_: 4poq I: [254077] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4poqj_: 4poq J: [254078] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4pora_: 4por A: [254079] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4porb_: 4por B: [254080] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4porc_: 4por C: [254081] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4pord_: 4por D: [254082] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4pore_: 4por E: [254083] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4porf_: 4por F: [254084] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4porg_: 4por G: [254085] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4porh_: 4por H: [254086] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4pori_: 4por I: [254087] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4porj_: 4por J: [254088] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4posa_: 4pos A: [240734] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4posb_: 4pos B: [238489] automated match to d1vpsb_ complexed with ca, edo, ipa |
Domain d4posc_: 4pos C: [240735] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4posd_: 4pos D: [240736] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4pose_: 4pos E: [240737] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4posf_: 4pos F: [240738] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4posg_: 4pos G: [240739] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4posh_: 4pos H: [240740] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4posi_: 4pos I: [240741] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4posj_: 4pos J: [240742] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4pota_: 4pot A: [254089] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4potb_: 4pot B: [254090] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4potc_: 4pot C: [254091] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4potd_: 4pot D: [254092] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4pote_: 4pot E: [254093] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4potf_: 4pot F: [254094] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4potg_: 4pot G: [254095] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4poth_: 4pot H: [254096] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4poti_: 4pot I: [254097] automated match to d4posb_ complexed with ca, edo, ipa |
Domain d4potj_: 4pot J: [254098] automated match to d4posb_ complexed with ca, edo, ipa |
Timeline for Species Human polyomavirus 9 [TaxId:943908] from b.121.6.1 automated matches: