Lineage for Species: Human polyomavirus 9 [TaxId: 943908]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2821496Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2823225Superfamily b.121.6: Group I dsDNA viruses [88648] (2 families) (S)
  5. 2823226Family b.121.6.1: Papovaviridae-like VP [88649] (3 proteins)
  6. 2823296Protein automated matches [191200] (13 species)
    not a true protein
  7. 2823375Species Human polyomavirus 9 [TaxId:943908] [229433] (7 PDB entries)

PDB entries in Species: Human polyomavirus 9 [TaxId: 943908]:

  1. Domain(s) for 4mbx:
    1. 2823386Domain d4mbxa1: 4mbx A:29-301 [235563]
      Other proteins in same PDB: d4mbxa2, d4mbxb2, d4mbxc2, d4mbxd2, d4mbxe2, d4mbxf2, d4mbxg2, d4mbxh2, d4mbxi2, d4mbxj2
      automated match to d4mbxe_
      complexed with ca, edo
    2. 2823387Domain d4mbxb1: 4mbx B:29-300 [235564]
      Other proteins in same PDB: d4mbxa2, d4mbxb2, d4mbxc2, d4mbxd2, d4mbxe2, d4mbxf2, d4mbxg2, d4mbxh2, d4mbxi2, d4mbxj2
      automated match to d4mbxe_
      complexed with ca, edo
    3. 2823388Domain d4mbxc1: 4mbx C:29-300 [235565]
      Other proteins in same PDB: d4mbxa2, d4mbxb2, d4mbxc2, d4mbxd2, d4mbxe2, d4mbxf2, d4mbxg2, d4mbxh2, d4mbxi2, d4mbxj2
      automated match to d4mbxe_
      complexed with ca, edo
    4. 2823389Domain d4mbxd1: 4mbx D:29-299 [229434]
      Other proteins in same PDB: d4mbxa2, d4mbxb2, d4mbxc2, d4mbxd2, d4mbxe2, d4mbxf2, d4mbxg2, d4mbxh2, d4mbxi2, d4mbxj2
      automated match to d1vpsb_
      complexed with ca, edo
    5. 2823390Domain d4mbxe1: 4mbx E:29-301 [229435]
      Other proteins in same PDB: d4mbxa2, d4mbxb2, d4mbxc2, d4mbxd2, d4mbxe2, d4mbxf2, d4mbxg2, d4mbxh2, d4mbxi2, d4mbxj2
      automated match to d1vpsb_
      complexed with ca, edo
    6. 2823391Domain d4mbxf1: 4mbx F:29-298 [229436]
      Other proteins in same PDB: d4mbxa2, d4mbxb2, d4mbxc2, d4mbxd2, d4mbxe2, d4mbxf2, d4mbxg2, d4mbxh2, d4mbxi2, d4mbxj2
      automated match to d1vpsb_
      complexed with ca, edo
    7. 2823392Domain d4mbxg1: 4mbx G:29-297 [235566]
      Other proteins in same PDB: d4mbxa2, d4mbxb2, d4mbxc2, d4mbxd2, d4mbxe2, d4mbxf2, d4mbxg2, d4mbxh2, d4mbxi2, d4mbxj2
      automated match to d4mbxd_
      complexed with ca, edo
    8. 2823393Domain d4mbxh1: 4mbx H:29-298 [235568]
      Other proteins in same PDB: d4mbxa2, d4mbxb2, d4mbxc2, d4mbxd2, d4mbxe2, d4mbxf2, d4mbxg2, d4mbxh2, d4mbxi2, d4mbxj2
      automated match to d4mbxd_
      complexed with ca, edo
    9. 2823394Domain d4mbxi1: 4mbx I:29-299 [235569]
      Other proteins in same PDB: d4mbxa2, d4mbxb2, d4mbxc2, d4mbxd2, d4mbxe2, d4mbxf2, d4mbxg2, d4mbxh2, d4mbxi2, d4mbxj2
      automated match to d4mbxd_
      complexed with ca, edo
    10. 2823395Domain d4mbxj1: 4mbx J:29-300 [235571]
      Other proteins in same PDB: d4mbxa2, d4mbxb2, d4mbxc2, d4mbxd2, d4mbxe2, d4mbxf2, d4mbxg2, d4mbxh2, d4mbxi2, d4mbxj2
      automated match to d4mbxe_
      complexed with ca, edo
  2. Domain(s) for 4mby:
    1. 2823376Domain d4mbya1: 4mby A:29-301 [235570]
      Other proteins in same PDB: d4mbya2, d4mbyb2, d4mbyc2, d4mbyd2, d4mbye2, d4mbyf2, d4mbyg2, d4mbyh2, d4mbyi2, d4mbyj2
      automated match to d4mbxe_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    2. 2823377Domain d4mbyb1: 4mby B:29-299 [235573]
      Other proteins in same PDB: d4mbya2, d4mbyb2, d4mbyc2, d4mbyd2, d4mbye2, d4mbyf2, d4mbyg2, d4mbyh2, d4mbyi2, d4mbyj2
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    3. 2823378Domain d4mbyc1: 4mby C:29-299 [235574]
      Other proteins in same PDB: d4mbya2, d4mbyb2, d4mbyc2, d4mbyd2, d4mbye2, d4mbyf2, d4mbyg2, d4mbyh2, d4mbyi2, d4mbyj2
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    4. 2823379Domain d4mbyd1: 4mby D:29-299 [235572]
      Other proteins in same PDB: d4mbya2, d4mbyb2, d4mbyc2, d4mbyd2, d4mbye2, d4mbyf2, d4mbyg2, d4mbyh2, d4mbyi2, d4mbyj2
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    5. 2823380Domain d4mbye1: 4mby E:29-301 [235576]
      Other proteins in same PDB: d4mbya2, d4mbyb2, d4mbyc2, d4mbyd2, d4mbye2, d4mbyf2, d4mbyg2, d4mbyh2, d4mbyi2, d4mbyj2
      automated match to d4mbxe_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    6. 2823381Domain d4mbyf1: 4mby F:29-298 [235575]
      Other proteins in same PDB: d4mbya2, d4mbyb2, d4mbyc2, d4mbyd2, d4mbye2, d4mbyf2, d4mbyg2, d4mbyh2, d4mbyi2, d4mbyj2
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    7. 2823382Domain d4mbyg1: 4mby G:29-297 [235577]
      Other proteins in same PDB: d4mbya2, d4mbyb2, d4mbyc2, d4mbyd2, d4mbye2, d4mbyf2, d4mbyg2, d4mbyh2, d4mbyi2, d4mbyj2
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    8. 2823383Domain d4mbyh1: 4mby H:29-298 [235579]
      Other proteins in same PDB: d4mbya2, d4mbyb2, d4mbyc2, d4mbyd2, d4mbye2, d4mbyf2, d4mbyg2, d4mbyh2, d4mbyi2, d4mbyj2
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    9. 2823384Domain d4mbyi1: 4mby I:29-298 [235578]
      Other proteins in same PDB: d4mbya2, d4mbyb2, d4mbyc2, d4mbyd2, d4mbye2, d4mbyf2, d4mbyg2, d4mbyh2, d4mbyi2, d4mbyj2
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    10. 2823385Domain d4mbyj1: 4mby J:29-299 [235580]
      Other proteins in same PDB: d4mbya2, d4mbyb2, d4mbyc2, d4mbyd2, d4mbye2, d4mbyf2, d4mbyg2, d4mbyh2, d4mbyi2, d4mbyj2
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
  3. Domain(s) for 4mbz:
    1. 2823406Domain d4mbza1: 4mbz A:29-301 [235581]
      Other proteins in same PDB: d4mbza2, d4mbzb2, d4mbzc2, d4mbzd2, d4mbze2, d4mbzf2, d4mbzg2, d4mbzh2, d4mbzi2, d4mbzj2
      automated match to d4mbxe_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    2. 2823407Domain d4mbzb1: 4mbz B:29-299 [235582]
      Other proteins in same PDB: d4mbza2, d4mbzb2, d4mbzc2, d4mbzd2, d4mbze2, d4mbzf2, d4mbzg2, d4mbzh2, d4mbzi2, d4mbzj2
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    3. 2823408Domain d4mbzc1: 4mbz C:29-299 [235583]
      Other proteins in same PDB: d4mbza2, d4mbzb2, d4mbzc2, d4mbzd2, d4mbze2, d4mbzf2, d4mbzg2, d4mbzh2, d4mbzi2, d4mbzj2
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    4. 2823409Domain d4mbzd1: 4mbz D:29-299 [235584]
      Other proteins in same PDB: d4mbza2, d4mbzb2, d4mbzc2, d4mbzd2, d4mbze2, d4mbzf2, d4mbzg2, d4mbzh2, d4mbzi2, d4mbzj2
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    5. 2823410Domain d4mbze1: 4mbz E:29-301 [235585]
      Other proteins in same PDB: d4mbza2, d4mbzb2, d4mbzc2, d4mbzd2, d4mbze2, d4mbzf2, d4mbzg2, d4mbzh2, d4mbzi2, d4mbzj2
      automated match to d4mbxe_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    6. 2823411Domain d4mbzf1: 4mbz F:29-298 [235587]
      Other proteins in same PDB: d4mbza2, d4mbzb2, d4mbzc2, d4mbzd2, d4mbze2, d4mbzf2, d4mbzg2, d4mbzh2, d4mbzi2, d4mbzj2
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    7. 2823412Domain d4mbzg1: 4mbz G:29-298 [235586]
      Other proteins in same PDB: d4mbza2, d4mbzb2, d4mbzc2, d4mbzd2, d4mbze2, d4mbzf2, d4mbzg2, d4mbzh2, d4mbzi2, d4mbzj2
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    8. 2823413Domain d4mbzh1: 4mbz H:29-298 [235588]
      Other proteins in same PDB: d4mbza2, d4mbzb2, d4mbzc2, d4mbzd2, d4mbze2, d4mbzf2, d4mbzg2, d4mbzh2, d4mbzi2, d4mbzj2
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    9. 2823414Domain d4mbzi1: 4mbz I:29-299 [235590]
      Other proteins in same PDB: d4mbza2, d4mbzb2, d4mbzc2, d4mbzd2, d4mbze2, d4mbzf2, d4mbzg2, d4mbzh2, d4mbzi2, d4mbzj2
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    10. 2823415Domain d4mbzj1: 4mbz J:29-300 [235589]
      Other proteins in same PDB: d4mbza2, d4mbzb2, d4mbzc2, d4mbzd2, d4mbze2, d4mbzf2, d4mbzg2, d4mbzh2, d4mbzi2, d4mbzj2
      automated match to d4mbxe_
      protein/DNA complex; complexed with ca, cl, edo, ipa
  4. Domain(s) for 4poq:
    1. 2823436Domain d4poqa_: 4poq A: [254069]
      automated match to d4posb_
      complexed with ca, edo, ipa
    2. 2823437Domain d4poqb_: 4poq B: [254070]
      automated match to d4posb_
      complexed with ca, edo, ipa
    3. 2823438Domain d4poqc_: 4poq C: [254071]
      automated match to d4posb_
      complexed with ca, edo, ipa
    4. 2823439Domain d4poqd_: 4poq D: [254072]
      automated match to d4posb_
      complexed with ca, edo, ipa
    5. 2823440Domain d4poqe_: 4poq E: [254073]
      automated match to d4posb_
      complexed with ca, edo, ipa
    6. 2823441Domain d4poqf_: 4poq F: [254074]
      automated match to d4posb_
      complexed with ca, edo, ipa
    7. 2823442Domain d4poqg_: 4poq G: [254075]
      automated match to d4posb_
      complexed with ca, edo, ipa
    8. 2823443Domain d4poqh_: 4poq H: [254076]
      automated match to d4posb_
      complexed with ca, edo, ipa
    9. 2823444Domain d4poqi_: 4poq I: [254077]
      automated match to d4posb_
      complexed with ca, edo, ipa
    10. 2823445Domain d4poqj_: 4poq J: [254078]
      automated match to d4posb_
      complexed with ca, edo, ipa
  5. Domain(s) for 4por:
    1. 2823416Domain d4pora_: 4por A: [254079]
      automated match to d4posb_
      complexed with ca, edo, ipa
    2. 2823417Domain d4porb_: 4por B: [254080]
      automated match to d4posb_
      complexed with ca, edo, ipa
    3. 2823418Domain d4porc_: 4por C: [254081]
      automated match to d4posb_
      complexed with ca, edo, ipa
    4. 2823419Domain d4pord_: 4por D: [254082]
      automated match to d4posb_
      complexed with ca, edo, ipa
    5. 2823420Domain d4pore_: 4por E: [254083]
      automated match to d4posb_
      complexed with ca, edo, ipa
    6. 2823421Domain d4porf_: 4por F: [254084]
      automated match to d4posb_
      complexed with ca, edo, ipa
    7. 2823422Domain d4porg_: 4por G: [254085]
      automated match to d4posb_
      complexed with ca, edo, ipa
    8. 2823423Domain d4porh_: 4por H: [254086]
      automated match to d4posb_
      complexed with ca, edo, ipa
    9. 2823424Domain d4pori_: 4por I: [254087]
      automated match to d4posb_
      complexed with ca, edo, ipa
    10. 2823425Domain d4porj_: 4por J: [254088]
      automated match to d4posb_
      complexed with ca, edo, ipa
  6. Domain(s) for 4pos:
    1. 2823396Domain d4posa_: 4pos A: [240734]
      automated match to d4posb_
      complexed with ca, edo, ipa
    2. 2823397Domain d4posb_: 4pos B: [238489]
      automated match to d1vpsb_
      complexed with ca, edo, ipa
    3. 2823398Domain d4posc_: 4pos C: [240735]
      automated match to d4posb_
      complexed with ca, edo, ipa
    4. 2823399Domain d4posd_: 4pos D: [240736]
      automated match to d4posb_
      complexed with ca, edo, ipa
    5. 2823400Domain d4pose_: 4pos E: [240737]
      automated match to d4posb_
      complexed with ca, edo, ipa
    6. 2823401Domain d4posf_: 4pos F: [240738]
      automated match to d4posb_
      complexed with ca, edo, ipa
    7. 2823402Domain d4posg_: 4pos G: [240739]
      automated match to d4posb_
      complexed with ca, edo, ipa
    8. 2823403Domain d4posh_: 4pos H: [240740]
      automated match to d4posb_
      complexed with ca, edo, ipa
    9. 2823404Domain d4posi_: 4pos I: [240741]
      automated match to d4posb_
      complexed with ca, edo, ipa
    10. 2823405Domain d4posj_: 4pos J: [240742]
      automated match to d4posb_
      complexed with ca, edo, ipa
  7. Domain(s) for 4pot:
    1. 2823426Domain d4pota_: 4pot A: [254089]
      automated match to d4posb_
      complexed with ca, edo, ipa
    2. 2823427Domain d4potb_: 4pot B: [254090]
      automated match to d4posb_
      complexed with ca, edo, ipa
    3. 2823428Domain d4potc_: 4pot C: [254091]
      automated match to d4posb_
      complexed with ca, edo, ipa
    4. 2823429Domain d4potd_: 4pot D: [254092]
      automated match to d4posb_
      complexed with ca, edo, ipa
    5. 2823430Domain d4pote_: 4pot E: [254093]
      automated match to d4posb_
      complexed with ca, edo, ipa
    6. 2823431Domain d4potf_: 4pot F: [254094]
      automated match to d4posb_
      complexed with ca, edo, ipa
    7. 2823432Domain d4potg_: 4pot G: [254095]
      automated match to d4posb_
      complexed with ca, edo, ipa
    8. 2823433Domain d4poth_: 4pot H: [254096]
      automated match to d4posb_
      complexed with ca, edo, ipa
    9. 2823434Domain d4poti_: 4pot I: [254097]
      automated match to d4posb_
      complexed with ca, edo, ipa
    10. 2823435Domain d4potj_: 4pot J: [254098]
      automated match to d4posb_
      complexed with ca, edo, ipa

More info for Species Human polyomavirus 9 [TaxId:943908] from b.121.6.1 automated matches

Timeline for Species Human polyomavirus 9 [TaxId:943908] from b.121.6.1 automated matches: