SCOPe 2.08: Species: Mouse (Mus musculus) [TaxId: 10090]

Lineage for Species: Mouse (Mus musculus) [TaxId: 10090]

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
Fold d.3: Cysteine proteinases [54000] (1 superfamily)
consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn

Superfamily d.3.1: Cysteine proteinases [54001] (24 families)

(S)

the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet

Family d.3.1.1: Papain-like [54002] (26 proteins)
Protein automated matches [190264] (12 species)
not a true protein
Species Mouse (Mus musculus) [TaxId:10090] [229208] (7 PDB entries)

PDB entries in Species: Mouse (Mus musculus) [TaxId: 10090]:

Domain(s) for 4bpv:
1. Domain d4bpva_: 4bpv A: [262533]
  automated match to d4bs5a_
  complexed with ofh
2. Domain d4bpvb_: 4bpv B: [256572]
  automated match to d4bs5a_
  complexed with ofh
3. Domain d4bpvc_: 4bpv C: [262534]
  automated match to d4bs5a_
  complexed with ofh
4. Domain d4bpvd_: 4bpv D: [262535]
  automated match to d4bs5a_
  complexed with ofh
5. Domain d4bpve_: 4bpv E: [262536]
  automated match to d4bs5a_
  complexed with ofh
6. Domain d4bpvk_: 4bpv K: [262537]
  automated match to d4bs5a_
  complexed with ofh
Domain(s) for 4bqv:
1. Domain d4bqva_: 4bqv A: [265947]
  automated match to d4bs5a_
  complexed with 8pw
2. Domain d4bqvb_: 4bqv B: [265948]
  automated match to d4bs5a_
  complexed with 8pw
3. Domain d4bqvc_: 4bqv C: [265949]
  automated match to d4bs5a_
  complexed with 8pw
4. Domain d4bqvd_: 4bqv D: [265950]
  automated match to d4bs5a_
  complexed with 8pw
5. Domain d4bqve_: 4bqv E: [265951]
  automated match to d4bs5a_
  complexed with 8pw
6. Domain d4bqvf_: 4bqv F: [265952]
  automated match to d4bs5a_
  complexed with 8pw
7. Domain d4bqvg_: 4bqv G: [265953]
  automated match to d4bs5a_
  complexed with 8pw
8. Domain d4bqvh_: 4bqv H: [265954]
  automated match to d4bs5a_
  complexed with 8pw
Domain(s) for 4bs5:
- Domain d4bs5a_: 4bs5 A: [229209]
  automated match to d2hhna_
  complexed with mg2
Domain(s) for 4bs6:
1. Domain d4bs6a_: 4bs6 A: [265955]
  automated match to d4bs5a_
  complexed with gol, jg7
2. Domain d4bs6b_: 4bs6 B: [265956]
  automated match to d4bs5a_
  complexed with gol, jg7
Domain(s) for 4bsq:
- Domain d4bsqa_: 4bsq A: [234279]
  automated match to d4bs5a_
  complexed with qqv, so4
Domain(s) for 4mzo:
1. Domain d4mzoa_: 4mzo A: [259385]
  automated match to d4bs5a_
  complexed with 2ew
2. Domain d4mzob_: 4mzo B: [259384]
  automated match to d4bs5a_
  complexed with 2ew
3. Domain d4mzoc_: 4mzo C: [263081]
  automated match to d4bs5a_
  complexed with 2ew
4. Domain d4mzod_: 4mzo D: [263082]
  automated match to d4bs5a_
  complexed with 2ew
5. Domain d4mzoe_: 4mzo E: [263083]
  automated match to d4bs5a_
  complexed with 2ew
6. Domain d4mzof_: 4mzo F: [263084]
  automated match to d4bs5a_
  complexed with 2ew
7. Domain d4mzog_: 4mzo G: [263085]
  automated match to d4bs5a_
  complexed with 2ew
8. Domain d4mzoh_: 4mzo H: [263086]
  automated match to d4bs5a_
  complexed with 2ew
Domain(s) for 4mzs:
1. Domain d4mzsa_: 4mzs A: [259077]
  automated match to d4bs5a_
  complexed with 2ev
2. Domain d4mzsb_: 4mzs B: [263087]
  automated match to d4bs5a_
  complexed with 2ev

More info for Species Mouse (Mus musculus) [TaxId:10090] from d.3.1.1 automated matches

Timeline for Species Mouse (Mus musculus) [TaxId:10090] from d.3.1.1 automated matches:

Species Mouse (Mus musculus) [TaxId:10090] from d.3.1.1 automated matches first appeared in SCOPe 2.03, called Species Mus musculus [TaxId:10090] from d.3.1.1 automated matches
Species Mouse (Mus musculus) [TaxId:10090] from d.3.1.1 automated matches appears in SCOPe 2.07