SCOPe 2.08: Domain d2yova_: 2yov A:

Lineage for d2yova_ (2yov A:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.39: EF Hand-like [47472] (4 superfamilies)
   core: 4 helices; array of 2 hairpins, opened

4. Superfamily a.39.1: EF-hand [47473] (12 families)
   Duplication: consists of two EF-hand units: each is made of two helices connected with calcium-binding loop

5. Family a.39.1.5: Calmodulin-like [47502] (24 proteins)
   Duplication: made with two pairs of EF-hands

6. Protein Frequenin (neuronal calcium sensor 1) [47535] (3 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [228901] (2 PDB entries)

8. Domain d2yova_: 2yov A: [228902]
   automated match to d1g8ia_
   complexed with ca, na
   has additional insertions and/or extensions that are not grouped together

Details for d2yova_

PDB Entry: 2yov, 1.95 Å

PDB Description: Neuronal calcium sensor (NCS-1)from Rattus norvegicus

PDB Compounds: (A:) neuronal calcium sensor 1

SCOPe Domain Sequences for d2yova_:

Sequence, based on SEQRES records:

>d2yova_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Norway rat (Rattus norvegicus) [TaxId: 10116]}
gksnsklkpevveeltrktyftekevqqwykgfikdcpsgqldaagfqkiykqffpfgdp
tkfatfvfnvfdenkdgriefsefiqalsvtsrgtldeklrwafklydldndgyitrnem
ldivdaiyqmvgntvelpeeentpekrvdrifammdknadgkltlqefqegskadpsivq
alslydglv

Sequence, based on observed residues (ATOM records):

>d2yova_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Norway rat (Rattus norvegicus) [TaxId: 10116]}
gksnsklkpevveeltrktyftekevqqwykgfikdcpsgqldaagfqkiykdptkfatf
vfnvfdenkdgriefsefiqalsvtsrgtldeklrwafklydldndgyitrnemldivda
iyqmpeeentpekrvdrifammdknadgkltlqefqegskadpsivqalslydglv

Timeline for d2yova_:

• d2yova_ first appeared in SCOPe 2.03
  
• d2yova_ appears in SCOPe 2.07