SCOPe 2.05: Domain d4n98b1: 4n98 B:1-122

Lineage for d4n98b1 (4n98 B:1-122)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.131: DNA clamp [55978] (1 superfamily)
   contains two helices and two beta sheets
   duplication: fold has internal pseudo two-fold symmetry

4. Superfamily d.131.1: DNA clamp [55979] (3 families)

5. Family d.131.1.1: DNA polymerase III, beta subunit [55980] (1 protein)
   duplication: consists of three domains of this fold

6. Protein DNA polymerase III, beta subunit [55981] (2 species)

7. Species Escherichia coli [TaxId:562] [55982] (30 PDB entries)
   Uniprot P00583

8. Domain d4n98b1: 4n98 B:1-122 [228851]
   automated match to d3d1ga1
   complexed with 4fc, ca, cl, peg

Details for d4n98b1

PDB Entry: 4n98, 1.7 Å

PDB Description: E. coli sliding clamp in complex with 4'-fluorobiphenyl-4-carboxylic acid

PDB Compounds: (B:) DNA polymerase III subunit beta

SCOPe Domain Sequences for d4n98b1:

Sequence, based on SEQRES records:

>d4n98b1 d.131.1.1 (B:1-122) DNA polymerase III, beta subunit {Escherichia coli [TaxId: 562]}
mkftverehllkplqqvsgplggrptlpilgnlllqvadgtlsltgtdlememvarvalv
qphepgattvparkffdicrglpegaeiavqlegermlvrsgrsrfslstlpaadfpnld
dw

Sequence, based on observed residues (ATOM records):

>d4n98b1 d.131.1.1 (B:1-122) DNA polymerase III, beta subunit {Escherichia coli [TaxId: 562]}
mkftverehllkplqqvsglpilgnlllqvadgtlsltgtdlememvarvalvqphepga
ttvparkffdicrglpegaeiavqlegermlvrsgrsrfslstlpaadfpnlddw

Timeline for d4n98b1:

• d4n98b1 first appeared in SCOPe 2.03
  
• d4n98b1 appears in SCOPe 2.04
  
• d4n98b1 appears in SCOPe 2.06
  
• d4n98b1 appears in the current release, SCOPe 2.08