Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1999823Fold a.61: Retroviral matrix proteins [47835] (1 superfamily)
    4-5 helices; right-handed superhelix
  4. 1999824Superfamily a.61.1: Retroviral matrix proteins [47836] (6 families) (S)
    the 5th, C-terminal helix is missing in some of the member structures
  5. 1999825Family a.61.1.1: Immunodeficiency virus matrix proteins [47837] (3 protein domains)
    automatically mapped to Pfam PF00540
  6. 1999847Protein automated matches [228657] (4 species)
    not a true protein

Species:

  1. 1999848Human immunodeficiency virus 1 [TaxId:11676] [255199] (3 PDB entries)
    1. Domain for 2h3f:
    2. Domain for 2h3i:
    3. Domain for 2h3v:
  2. 1999852Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] [228658] (1 PDB entry)
  3. 1999854Human immunodeficiency virus type 1 [TaxId:11698] [255469] (2 PDB entries)
    1. Domain for 2lya:
    2. Domain for 2lyb:
  4. 1999857Human immunodeficiency virus type 2 [TaxId:11720] [255318] (3 PDB entries)
    1. Domain for 2k4e:
    2. Domain for 2k4h:
    3. Domain for 2k4i:

More info for Protein automated matches from a.61.1.1: Immunodeficiency virus matrix proteins

Timeline for Protein automated matches from a.61.1.1: Immunodeficiency virus matrix proteins: