Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2782725Fold b.34: SH3-like barrel [50036] (21 superfamilies)
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. 2784275Superfamily b.34.6: Cell growth inhibitor/plasmid maintenance toxic component [50118] (4 families) (S)
    contains insert beta-sheet subdomain and C-terminal helix
  5. 2784312Family b.34.6.2: Kid/PemK [82075] (4 proteins)
    automatically mapped to Pfam PF02452
  6. 2784335Protein automated matches [228538] (6 species)
    not a true protein

Species:

  1. 2784336Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [228921] (1 PDB entry)
  2. 2784339Bacillus subtilis [TaxId:224308] [228539] (1 PDB entry)
  3. 2784344Escherichia coli [TaxId:83333] [312759] (6 PDB entries)
    1. Domains for 5ck9:
      1. 2784347Domain d5ck9a_: 5ck9 A: [312878]
        Other proteins in same PDB: d5ck9b2
        automated match to d1ub4a_
        complexed with 1pe
      2. 2784348Domain d5ck9b1: 5ck9 B:2-111 [316591]
        Other proteins in same PDB: d5ck9b2
        automated match to d5ck9a_
        complexed with 1pe
    2. Domains for 5ckb:
      1. 2784355Domain d5ckba_: 5ckb A: [312802]
        automated match to d1ub4a_
      2. 2784356Domain d5ckbb_: 5ckb B: [312770]
        automated match to d1ub4a_
    3. Domains for 5ckd:
      1. 2784345Domain d5ckda_: 5ckd A: [312761]
        Other proteins in same PDB: d5ckdb2
        automated match to d1ub4a_
        complexed with na
      2. 2784346Domain d5ckdb1: 5ckd B:2-111 [316542]
        Other proteins in same PDB: d5ckdb2
        automated match to d5ck9a_
        complexed with na
    4. Domains for 5cke:
      1. 2784349Domain d5ckea1: 5cke A:2-111 [316573]
        Other proteins in same PDB: d5ckea2, d5ckeb2
        automated match to d5ck9a_
        complexed with mrd, so4
      2. 2784350Domain d5ckeb1: 5cke B:2-111 [316534]
        Other proteins in same PDB: d5ckea2, d5ckeb2
        automated match to d5ck9a_
        complexed with mrd, so4
    5. Domains for 5ckf:
      1. 2784353Domain d5ckfa_: 5ckf A: [312786]
        Other proteins in same PDB: d5ckfb2
        automated match to d1ub4a_
        complexed with na
      2. 2784354Domain d5ckfb1: 5ckf B:2-111 [316528]
        Other proteins in same PDB: d5ckfb2
        automated match to d5ck9a_
        complexed with na
    6. Domains for 5ckh:
      1. 2784351Domain d5ckha_: 5ckh A: [312848]
        Other proteins in same PDB: d5ckhb2
        automated match to d1ub4a_
      2. 2784352Domain d5ckhb1: 5ckh B:2-111 [316599]
        Other proteins in same PDB: d5ckhb2
        automated match to d5ck9a_
  4. 2784357Staphylococcus aureus [TaxId:1280] [256429] (1 PDB entry)
  5. 2784360Staphylococcus aureus [TaxId:158878] [268507] (1 PDB entry)
  6. 2784362Staphylococcus aureus [TaxId:158879] [257115] (4 PDB entries)
    1. Domains for 4mzm:
      1. 2784363Domain d4mzma1: 4mzm A:2-114 [257116]
        Other proteins in same PDB: d4mzma2, d4mzmb2, d4mzmc2, d4mzmd2
        automated match to d4hkea_
      2. 2784364Domain d4mzmb1: 4mzm B:2-113 [257117]
        Other proteins in same PDB: d4mzma2, d4mzmb2, d4mzmc2, d4mzmd2
        automated match to d4hkea_
      3. 2784365Domain d4mzmc1: 4mzm C:2-113 [263079]
        Other proteins in same PDB: d4mzma2, d4mzmb2, d4mzmc2, d4mzmd2
        automated match to d2mf2a_
      4. 2784366Domain d4mzmd1: 4mzm D:2-113 [263080]
        Other proteins in same PDB: d4mzma2, d4mzmb2, d4mzmc2, d4mzmd2
        automated match to d2mf2a_
    2. Domains for 4mzp:
      1. 2784370Domain d4mzpa1: 4mzp A:2-114 [266852]
        Other proteins in same PDB: d4mzpa2, d4mzpb2, d4mzpc2, d4mzpd2, d4mzpe2, d4mzpf2, d4mzpg2, d4mzph2
        automated match to d2mf2a_
      2. 2784371Domain d4mzpb1: 4mzp B:2-113 [266853]
        Other proteins in same PDB: d4mzpa2, d4mzpb2, d4mzpc2, d4mzpd2, d4mzpe2, d4mzpf2, d4mzpg2, d4mzph2
        automated match to d2mf2a_
      3. 2784372Domain d4mzpc1: 4mzp C:2-113 [266854]
        Other proteins in same PDB: d4mzpa2, d4mzpb2, d4mzpc2, d4mzpd2, d4mzpe2, d4mzpf2, d4mzpg2, d4mzph2
        automated match to d2mf2a_
      4. 2784373Domain d4mzpd1: 4mzp D:2-113 [266855]
        Other proteins in same PDB: d4mzpa2, d4mzpb2, d4mzpc2, d4mzpd2, d4mzpe2, d4mzpf2, d4mzpg2, d4mzph2
        automated match to d2mf2a_
      5. 2784374Domain d4mzpe1: 4mzp E:2-113 [266856]
        Other proteins in same PDB: d4mzpa2, d4mzpb2, d4mzpc2, d4mzpd2, d4mzpe2, d4mzpf2, d4mzpg2, d4mzph2
        automated match to d2mf2a_
      6. 2784375Domain d4mzpf1: 4mzp F:2-114 [266857]
        Other proteins in same PDB: d4mzpa2, d4mzpb2, d4mzpc2, d4mzpd2, d4mzpe2, d4mzpf2, d4mzpg2, d4mzph2
        automated match to d2mf2a_
      7. 2784376Domain d4mzpg1: 4mzp G:2-113 [266858]
        Other proteins in same PDB: d4mzpa2, d4mzpb2, d4mzpc2, d4mzpd2, d4mzpe2, d4mzpf2, d4mzpg2, d4mzph2
        automated match to d2mf2a_
      8. 2784377Domain d4mzph1: 4mzp H:2-114 [266859]
        Other proteins in same PDB: d4mzpa2, d4mzpb2, d4mzpc2, d4mzpd2, d4mzpe2, d4mzpf2, d4mzpg2, d4mzph2
        automated match to d2mf2a_
    3. Domains for 4mzt:
      1. 2784368Domain d4mzta1: 4mzt A:2-113 [266860]
        Other proteins in same PDB: d4mzta2, d4mztb2
        automated match to d2mf2a_
      2. 2784369Domain d4mztb1: 4mzt B:2-113 [266861]
        Other proteins in same PDB: d4mzta2, d4mztb2
        automated match to d2mf2a_
    4. Domain for 4of1:

More info for Protein automated matches from b.34.6.2: Kid/PemK

Timeline for Protein automated matches from b.34.6.2: Kid/PemK: