Lineage for Species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2164731Fold d.22: GFP-like [54510] (1 superfamily)
    beta-sheet folds into a barrel (n=11, S=14) around the central helix
  4. 2164732Superfamily d.22.1: GFP-like [54511] (3 families) (S)
  5. 2165335Family d.22.1.0: automated matches [191400] (1 protein)
    not a true family
  6. 2165336Protein automated matches [190526] (21 species)
    not a true protein
  7. 2165337Species Amphioxus (Branchiostoma lanceolatum) [TaxId:7740] [227942] (7 PDB entries)

PDB entries in Species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]:

  1. Domain(s) for 4hvf:
    1. 2165338Domain d4hvfa1: 4hvf A:2-220 [234704]
      Other proteins in same PDB: d4hvfa2, d4hvfb2, d4hvfc2, d4hvfd2
      automated match to d4hvfd_
      complexed with gol
    2. 2165339Domain d4hvfb1: 4hvf B:2-220 [234705]
      Other proteins in same PDB: d4hvfa2, d4hvfb2, d4hvfc2, d4hvfd2
      automated match to d4hvfd_
      complexed with gol
    3. 2165340Domain d4hvfc1: 4hvf C:2-220 [234706]
      Other proteins in same PDB: d4hvfa2, d4hvfb2, d4hvfc2, d4hvfd2
      automated match to d4hvfd_
      complexed with gol
    4. 2165341Domain d4hvfd1: 4hvf D:2-220 [227943]
      Other proteins in same PDB: d4hvfa2, d4hvfb2, d4hvfc2, d4hvfd2
      automated match to d4dkma_
      complexed with gol
  2. Domain(s) for 4jeo:
    1. 2165344Domain d4jeoa_: 4jeo A: [227948]
      automated match to d4dkna_
      complexed with gol
    2. 2165345Domain d4jeob_: 4jeo B: [234977]
      automated match to d4jeoa_
      complexed with gol
  3. Domain(s) for 4jf9:
    1. 2165346Domain d4jf9a_: 4jf9 A: [234985]
      automated match to d4jeoa_
    2. 2165347Domain d4jf9b_: 4jf9 B: [234984]
      automated match to d4jeoa_
  4. Domain(s) for 4jge:
    1. 2165342Domain d4jgea_: 4jge A: [234988]
      automated match to d4jeoa_
      complexed with gol
    2. 2165343Domain d4jgeb_: 4jge B: [234989]
      automated match to d4jeoa_
      complexed with gol
  5. Domain(s) for 5ltp:
    1. 2284149Domain d5ltpa_: 5ltp A: [327450]
      Other proteins in same PDB: d5ltpb2, d5ltpc2, d5ltpd2, d5ltpe2, d5ltpf2
      automated match to d3neda_
      complexed with cl, flc
    2. 2284161Domain d5ltpe1: 5ltp E:1-219 [327462]
      Other proteins in same PDB: d5ltpb2, d5ltpc2, d5ltpd2, d5ltpe2, d5ltpf2
      automated match to d3neda_
      complexed with cl, flc
    3. 2284168Domain d5ltpb1: 5ltp B:-3-219 [327469]
      Other proteins in same PDB: d5ltpb2, d5ltpc2, d5ltpd2, d5ltpe2, d5ltpf2
      automated match to d3neda_
      complexed with cl, flc
    4. 2284175Domain d5ltpd1: 5ltp D:0-219 [327476]
      Other proteins in same PDB: d5ltpb2, d5ltpc2, d5ltpd2, d5ltpe2, d5ltpf2
      automated match to d3neda_
      complexed with cl, flc
    5. 2284184Domain d5ltpc1: 5ltp C:0-219 [327485]
      Other proteins in same PDB: d5ltpb2, d5ltpc2, d5ltpd2, d5ltpe2, d5ltpf2
      automated match to d3neda_
      complexed with cl, flc
    6. 2284237Domain d5ltpf1: 5ltp F:0-219 [327538]
      Other proteins in same PDB: d5ltpb2, d5ltpc2, d5ltpd2, d5ltpe2, d5ltpf2
      automated match to d3neda_
      complexed with cl, flc
  6. Domain(s) for 5ltq:
    1. 2283692Domain d5ltqg_: 5ltq G: [326993]
      Other proteins in same PDB: d5ltqa2, d5ltqb2, d5ltqc2, d5ltqd2, d5ltqf2, d5ltqj2, d5ltql2, d5ltqn2, d5ltqp2
      automated match to d4jgea_
      complexed with cl
    2. 2283694Domain d5ltqn1: 5ltq N:4-219 [326995]
      Other proteins in same PDB: d5ltqa2, d5ltqb2, d5ltqc2, d5ltqd2, d5ltqf2, d5ltqj2, d5ltql2, d5ltqn2, d5ltqp2
      automated match to d4jgea_
      complexed with cl
    3. 2283697Domain d5ltqa1: 5ltq A:2-219 [326998]
      Other proteins in same PDB: d5ltqa2, d5ltqb2, d5ltqc2, d5ltqd2, d5ltqf2, d5ltqj2, d5ltql2, d5ltqn2, d5ltqp2
      automated match to d4jgea_
      complexed with cl
    4. 2283700Domain d5ltqi_: 5ltq I: [327001]
      Other proteins in same PDB: d5ltqa2, d5ltqb2, d5ltqc2, d5ltqd2, d5ltqf2, d5ltqj2, d5ltql2, d5ltqn2, d5ltqp2
      automated match to d4jgea_
      complexed with cl
    5. 2283710Domain d5ltqd1: 5ltq D:2-219 [327011]
      Other proteins in same PDB: d5ltqa2, d5ltqb2, d5ltqc2, d5ltqd2, d5ltqf2, d5ltqj2, d5ltql2, d5ltqn2, d5ltqp2
      automated match to d4jgea_
      complexed with cl
    6. 2283736Domain d5ltql1: 5ltq L:2-219 [327037]
      Other proteins in same PDB: d5ltqa2, d5ltqb2, d5ltqc2, d5ltqd2, d5ltqf2, d5ltqj2, d5ltql2, d5ltqn2, d5ltqp2
      automated match to d4jgea_
      complexed with cl
    7. 2283750Domain d5ltqk_: 5ltq K: [327051]
      Other proteins in same PDB: d5ltqa2, d5ltqb2, d5ltqc2, d5ltqd2, d5ltqf2, d5ltqj2, d5ltql2, d5ltqn2, d5ltqp2
      automated match to d4jgea_
      complexed with cl
    8. 2283752Domain d5ltqc1: 5ltq C:2-219 [327053]
      Other proteins in same PDB: d5ltqa2, d5ltqb2, d5ltqc2, d5ltqd2, d5ltqf2, d5ltqj2, d5ltql2, d5ltqn2, d5ltqp2
      automated match to d4jgea_
      complexed with cl
    9. 2283761Domain d5ltqp1: 5ltq P:2-219 [327062]
      Other proteins in same PDB: d5ltqa2, d5ltqb2, d5ltqc2, d5ltqd2, d5ltqf2, d5ltqj2, d5ltql2, d5ltqn2, d5ltqp2
      automated match to d4jgea_
      complexed with cl
    10. 2283763Domain d5ltqb1: 5ltq B:2-219 [327064]
      Other proteins in same PDB: d5ltqa2, d5ltqb2, d5ltqc2, d5ltqd2, d5ltqf2, d5ltqj2, d5ltql2, d5ltqn2, d5ltqp2
      automated match to d4jgea_
      complexed with cl
    11. 2283772Domain d5ltqm_: 5ltq M: [327073]
      Other proteins in same PDB: d5ltqa2, d5ltqb2, d5ltqc2, d5ltqd2, d5ltqf2, d5ltqj2, d5ltql2, d5ltqn2, d5ltqp2
      automated match to d4jgea_
      complexed with cl
    12. 2283774Domain d5ltqh_: 5ltq H: [327075]
      Other proteins in same PDB: d5ltqa2, d5ltqb2, d5ltqc2, d5ltqd2, d5ltqf2, d5ltqj2, d5ltql2, d5ltqn2, d5ltqp2
      automated match to d4jgea_
      complexed with cl
    13. 2283782Domain d5ltqo_: 5ltq O: [327083]
      Other proteins in same PDB: d5ltqa2, d5ltqb2, d5ltqc2, d5ltqd2, d5ltqf2, d5ltqj2, d5ltql2, d5ltqn2, d5ltqp2
      automated match to d4jgea_
      complexed with cl
    14. 2283786Domain d5ltqf1: 5ltq F:3-219 [327087]
      Other proteins in same PDB: d5ltqa2, d5ltqb2, d5ltqc2, d5ltqd2, d5ltqf2, d5ltqj2, d5ltql2, d5ltqn2, d5ltqp2
      automated match to d4jgea_
      complexed with cl
    15. 2283796Domain d5ltqe_: 5ltq E: [327097]
      Other proteins in same PDB: d5ltqa2, d5ltqb2, d5ltqc2, d5ltqd2, d5ltqf2, d5ltqj2, d5ltql2, d5ltqn2, d5ltqp2
      automated match to d4jgea_
      complexed with cl
    16. 2283801Domain d5ltqj1: 5ltq J:2-219 [327102]
      Other proteins in same PDB: d5ltqa2, d5ltqb2, d5ltqc2, d5ltqd2, d5ltqf2, d5ltqj2, d5ltql2, d5ltqn2, d5ltqp2
      automated match to d4jgea_
      complexed with cl
  7. Domain(s) for 5ltr:

More info for Species Amphioxus (Branchiostoma lanceolatum) [TaxId:7740] from d.22.1.0 automated matches

Timeline for Species Amphioxus (Branchiostoma lanceolatum) [TaxId:7740] from d.22.1.0 automated matches: