SCOPe 2.04: Domain d4gnja_: 4gnj A:

Lineage for d4gnja_ (4gnj A:)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.1: Triosephosphate isomerase (TIM) [51351] (2 families)

5. Family c.1.1.0: automated matches [191424] (1 protein)
   not a true family

6. Protein automated matches [190605] (13 species)
   not a true protein

7. Species Leishmania sp. [TaxId:438838] [227847] (1 PDB entry)

8. Domain d4gnja_: 4gnj A: [227848]
   automated match to d4ff7a_
   complexed with ars, na

Details for d4gnja_

PDB Entry: 4gnj, 1.93 Å

PDB Description: crystal structure analysis of leishmania siamensis triosephosphate isomerase

PDB Compounds: (A:) triosephosphate isomerase

SCOPe Domain Sequences for d4gnja_:

Sequence, based on SEQRES records:

>d4gnja_ c.1.1.0 (A:) automated matches {Leishmania sp. [TaxId: 438838]}
kpqpivaanwkcngttasieklvqvlnehqidhdvqcvvapsfvhipmvqaklcnpkyav
saenaiaksgaftgevsmpilkdlgvswvilghserrtyygetdgvvaqkvadaynqgfm
viacigetlqqreanqtakvvlsqtaaiaaklpkeawsqivlayepvwaigtgkvatpeq
aqevhallrqwvsekigngvatklrilyggsvtagnaktlymkpdingflvggaslkpef
rdiidatr

Sequence, based on observed residues (ATOM records):

>d4gnja_ c.1.1.0 (A:) automated matches {Leishmania sp. [TaxId: 438838]}
kpqpivaanwkcngttasieklvqvlnehqidhdvqcvvapsfvhipmvqaklcnpkyav
saenaiaksgaftgevsmpilkdlgvswvilghserrtyygetdgvvaqkvadaynqgfm
viacigetlqqreanqtakvvlsqtaaiaaklpkeawsqivlayepvwaigtkvatpeqa
qevhallrqwvsekigngvatklrilyggsvtagnaktlymkpdingflvggaslkpefr
diidatr

Timeline for d4gnja_:

• d4gnja_ first appeared in SCOPe 2.03
  
• d4gnja_ appears in SCOPe 2.05
  
• d4gnja_ appears in the current release, SCOPe 2.08