SCOPe 2.05: Domain d4gg9a_: 4gg9 A:

Lineage for d4gg9a_ (4gg9 A:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.20: tRNA-guanine transglycosylase [51713] (1 family)

5. Family c.1.20.1: tRNA-guanine transglycosylase [51714] (2 proteins)

6. Protein Queosine tRNA-guanine transglycosylase [51715] (3 species)
   contains zinc-binding subdomain

7. Species Zymomonas mobilis [TaxId:264203] [224878] (19 PDB entries)

8. Domain d4gg9a_: 4gg9 A: [227666]
   automated match to d1r5ya_
   protein/RNA complex; complexed with 0ww, gol, zn

Details for d4gg9a_

PDB Entry: 4gg9, 1.48 Å

PDB Description: trna guanine transglycosylase in complex with thiophene-substituted lin-benzohypoxanthine inhibitor

PDB Compounds: (A:) Queuine tRNA-ribosyltransferase

SCOPe Domain Sequences for d4gg9a_:

Sequence, based on SEQRES records:

>d4gg9a_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 264203]}
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilgn
tyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslssltkqseegvtfkshldg
srhmlspersieiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsrk
eqaenaalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpm
lpddkphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfsed
lkpldsechcavcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegrf
sqfaqdfraryf

Sequence, based on observed residues (ATOM records):

>d4gg9a_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 264203]}
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtatvkalkpetvratgadiilgnt
yhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvqseegvtfmlspersieiqhllg
sdivmafdectpypatpsraassmersmrwakrsrdafdsrkeqaenaalfgiqqgsvfe
nlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpmlpddkphylmgvgkpddi
vgavergidmfdcvlptrsgrngqaftwdgpinirnarfsedlkpldsechcavcqkwsr
ayihhlirageilgamlmtehniafyqqlmqkirdsisegrfsqfaqdfraryf

Timeline for d4gg9a_:

• d4gg9a_ first appeared in SCOPe 2.03
  
• d4gg9a_ appears in SCOPe 2.04
  
• d4gg9a_ appears in SCOPe 2.06
  
• d4gg9a_ appears in the current release, SCOPe 2.08