Lineage for d2pcdm_ (2pcd M:)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2034780Fold b.3: Prealbumin-like [49451] (7 superfamilies)
    sandwich; 7 strands in 2 sheets, greek-key
    variations: some members have additional 1-2 strands to common fold
  4. 2035756Superfamily b.3.6: Aromatic compound dioxygenase [49482] (2 families) (S)
  5. 2035757Family b.3.6.1: Aromatic compound dioxygenase [49483] (5 protein domains)
    sandwich; 9 strands in 2 sheets
  6. 2035966Protein Protocatechuate-3,4-dioxygenase, beta chain [49489] (2 species)
  7. 2035981Species Pseudomonas putida [TaxId:303] [49490] (36 PDB entries)
  8. 2036099Domain d2pcdm_: 2pcd M: [22760]
    Other proteins in same PDB: d2pcda_, d2pcdb_, d2pcdc_, d2pcdd_, d2pcde_, d2pcdf_
    complexed with fe

Details for d2pcdm_

PDB Entry: 2pcd (more details), 2.15 Å

PDB Description: structure of protocatechuate 3,4-dioxygenase from pseudomonas aeruginosa at 2.15 angstroms resolution
PDB Compounds: (M:) protocatechuate 3,4-dioxygenase (beta chain)

SCOPe Domain Sequences for d2pcdm_:

Sequence, based on SEQRES records: (download)

>d2pcdm_ b.3.6.1 (M:) Protocatechuate-3,4-dioxygenase, beta chain {Pseudomonas putida [TaxId: 303]}
paqdnsrfvirdrnwhpkaltpdyktsiarsprqalvsipqsisettgpnfshlgfgahd
hdlllnfnngglpigeriivagrvvdqygkpvpntlvemwqanaggryrhkndrylapld
pnfggvgrcltdsdgyysfrtikpgpypwrngpndwrpahihfgisgpsiatklitqlyf
egdplipmcpivksianpeavqqliakldmnnanpmdclayrfdivlrgqrkthfe

Sequence, based on observed residues (ATOM records): (download)

>d2pcdm_ b.3.6.1 (M:) Protocatechuate-3,4-dioxygenase, beta chain {Pseudomonas putida [TaxId: 303]}
paqdnsrfvirdrnwhpkaltpdyktsiarsprqalvsipqsisettgpnfshlgfgahd
hdlllnfglpigeriivagrvvdqygkpvpntlvemwqanaggryrhkndrylapldpnf
ggvgrcltdsdgyysfrtikpgpypwrngpndwrpahihfgisgpsiatklitqlyfegd
plipmcpivksianpeavqqliakldmnnanpmdclayrfdivlrgqrkthfe

SCOPe Domain Coordinates for d2pcdm_:

Click to download the PDB-style file with coordinates for d2pcdm_.
(The format of our PDB-style files is described here.)

Timeline for d2pcdm_: