Lineage for d4ko0a2 (4ko0 A:430-554)

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1857400Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 1859086Superfamily c.55.3: Ribonuclease H-like [53098] (15 families) (S)
    consists of one domain of this fold
  5. 1860195Family c.55.3.0: automated matches [191357] (1 protein)
    not a true family
  6. 1860196Protein automated matches [190396] (30 species)
    not a true protein
  7. 1860325Species Human immunodeficiency virus type 1 [TaxId:11678] [225971] (18 PDB entries)
  8. 1860334Domain d4ko0a2: 4ko0 A:430-554 [227596]
    Other proteins in same PDB: d4ko0a1, d4ko0b_
    automated match to d4g1qa2
    protein/DNA complex; protein/RNA complex; complexed with edo, jlj, so4

Details for d4ko0a2

PDB Entry: 4ko0 (more details), 1.95 Å

PDB Description: crystal structure of hiv-1 reverse transcriptase (rt) in complex with an anilinylpyrimidine derivative (jlj-135)
PDB Compounds: (A:) HIV-1 reverse transcriptase, p66 subunit

SCOPe Domain Sequences for d4ko0a2:

Sequence; same for both SEQRES and ATOM records: (download)

>d4ko0a2 c.55.3.0 (A:430-554) automated matches {Human immunodeficiency virus type 1 [TaxId: 11678]}
ekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiylalqds
glevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvd
klvsa

SCOPe Domain Coordinates for d4ko0a2:

Click to download the PDB-style file with coordinates for d4ko0a2.
(The format of our PDB-style files is described here.)

Timeline for d4ko0a2:

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Domains from same chain:
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d4ko0a1
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Domains from other chains:
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d4ko0b_