SCOPe 2.03: Domain d4kdma_: 4kdm A:

Lineage for d4kdma_ (4kdm A:)

1. Root: SCOPe 2.03

2. Class b: All beta proteins [48724] (174 folds)

3. Fold b.19: Viral protein domain [49817] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll; form trimers

4. Superfamily b.19.1: Viral protein domain [49818] (4 families)
   forms homotrimers

5. Family b.19.1.2: Influenza hemagglutinin headpiece [49823] (2 proteins)

6. Protein Hemagglutinin [49824] (6 species)
   includes rudiment esterase domain

7. Species Influenza A virus, different strains [TaxId:11320] [49825] (86 PDB entries)

8. Domain d4kdma_: 4kdm A: [227556]
   automated match to d4kpsa_
   complexed with nag

Details for d4kdma_

PDB Entry: 4kdm, 2.5 Å

PDB Description: crystal structure of the hemagglutinin of ferret-transmissible h5n1 virus

PDB Compounds: (A:) Hemagglutinin

SCOPe Domain Sequences for d4kdma_:

Sequence; same for both SEQRES and ATOM records:

>d4kdma_ b.19.1.2 (A:) Hemagglutinin {Influenza A virus, different strains [TaxId: 11320]}
qdqicigyhannsteqvdtimeknvtvthaqdilekkhngklcdldgvkplilrdcsvag
wllgnpmcdefinvpewsyivekanpvndlcypgdfndyeelkhllsrinhfekiqiipk
sswssheaslgvssacpyqgkssffrnvvwlikkdstyptikrsynntnqedllvlwgih
hpndaaeqtklyqnpttyisvgtstlnqrlvpriatrskvkglsgrmeffwtilkpndai
nfesngnfiapeyaykivkkgdstimkseleygncntkcqtpmgainssmpfhnihplti
gecpkyvksnrlvlaiglrnsp

Timeline for d4kdma_:

• d4kdma_ is new in SCOPe 2.03-stable
  
• d4kdma_ appears in SCOPe 2.04
  
• d4kdma_ appears in the current release, SCOPe 2.08, called d4kdma1