SCOPe 2.05: Domain d4jybb_: 4jyb B:

Lineage for d4jybb_ (4jyb B:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (25 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.10: Nitrogenase iron protein-like [52652] (16 proteins)
   core: parallel beta-sheet of 7 strands; order 3241567

6. Protein Metallochaperone MeaB [159564] (1 species)
   ArgK-like (sub)family; Pfam PF03308

7. Species Methylobacterium extorquens [TaxId:408] [159565] (5 PDB entries)
   Uniprot Q8RPA0 5-327

8. Domain d4jybb_: 4jyb B: [227545]
   automated match to d2qm8a_
   complexed with gnp

Details for d4jybb_

PDB Entry: 4jyb, 2.1 Å

PDB Description: MeaB, A Bacterial Homolog of MMAA, Bound to GMPPNP

PDB Compounds: (B:) Methylmalonyl-CoA mutase accessory protein

SCOPe Domain Sequences for d4jybb_:

Sequence, based on SEQRES records:

>d4jybb_ c.37.1.10 (B:) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
dmdtlrerllagdraalaraitlaesrradhraavrdlidavlpqtgrairvgitgvpgv
gksttidalgslltaaghkvavlavdpsstrtggsilgdktrmarlaidrnafirpspss
gtlggvaaktretmllceaagfdvilvetvgvgqsetavadltdfflvlmlpgagdelqg
ikkgifeladmiavnkaddgdgerrasaaaseyraalhiltppsatwtppvvtisglhgk
gldslwsriedhrskltatgeiagkrreqdvkwmwalvherlhqrlvgsaevrqataeae
ravaggehspaagadaiatligl

Sequence, based on observed residues (ATOM records):

>d4jybb_ c.37.1.10 (B:) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
dmdtlrerllagdraalaraitlaesrradhraavrdlidavlpqtgrairvgitgvpgv
gksttidalgslltaaghkvavlavdpsstrtggsilgdktrmarlaidrnafirpspss
gtlggvaaktretmllceaagfdvilvetvgvgqsetavadltdfflvlmlpgkkgifel
admiavnkaddgdgerrasaaaseyraalhiltppsatwtppvvtisglhgkgldslwsr
iedhrskltatgeiagkrreqdvkwmwalvherlhqrlvgsaevrqataeaeravaggeh
spaagadaiatligl

Timeline for d4jybb_:

• d4jybb_ first appeared in SCOPe 2.03
  
• d4jybb_ appears in SCOPe 2.04
  
• d4jybb_ appears in SCOPe 2.06
  
• d4jybb_ appears in the current release, SCOPe 2.08