Lineage for Protein: automated matches
- Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds) 
Fold c.17: Caspase-like [52128] (1 superfamily)
3 layers, a/b/a; core: mixed beta-sheet of 6 strands, order 213456, strand 6 is antiparallel to the restSuperfamily c.17.1: Caspase-like [52129] (3 families) 
mature protein may be composed of two chains folded in a single domain
Family c.17.1.2: Gingipain R (RgpB), N-terminal domain [52137] (2 proteins)
contains extra N-terminal alpha/beta subdomain
automatically mapped to Pfam PF01364
Protein automated matches [227116] (1 species)
not a true protein
Species:
Porphyromonas gingivalis [TaxId:242619] [226634] (1 PDB entry) - Domains for 4ief:
Domain d4iefb1: 4ief B:239-579 [223140]
Other proteins in same PDB: d4iefb2, d4iefb3, d4iefd2, d4iefd3, d4ieff2, d4ieff3, d4iefh2, d4iefh3
automated match to d1cvra2
complexed with ba, ca, cl, gol, mg, na, trs
Domain d4iefd1: 4ief D:238-579 [223142]
Other proteins in same PDB: d4iefb2, d4iefb3, d4iefd2, d4iefd3, d4ieff2, d4ieff3, d4iefh2, d4iefh3
automated match to d1cvra2
complexed with ba, ca, cl, gol, mg, na, trs
Domain d4ieff1: 4ief F:238-579 [223144]
Other proteins in same PDB: d4iefb2, d4iefb3, d4iefd2, d4iefd3, d4ieff2, d4ieff3, d4iefh2, d4iefh3
automated match to d1cvra2
complexed with ba, ca, cl, gol, mg, na, trs
Domain d4iefh1: 4ief H:238-579 [223146]
Other proteins in same PDB: d4iefb2, d4iefb3, d4iefd2, d4iefd3, d4ieff2, d4ieff3, d4iefh2, d4iefh3
automated match to d1cvra2
complexed with ba, ca, cl, gol, mg, na, trs
- Domains for 4ief:
More info for Protein automated matches from c.17.1.2: Gingipain R (RgpB), N-terminal domain
Timeline for Protein automated matches from c.17.1.2: Gingipain R (RgpB), N-terminal domain:
- Protein automated matches from c.17.1.2: Gingipain R (RgpB), N-terminal domain first appeared in SCOPe 2.03
- Protein automated matches from c.17.1.2: Gingipain R (RgpB), N-terminal domain appears in SCOPe 2.07