Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2106750Fold c.28: Cryptochrome/photolyase, N-terminal domain [52424] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32145; Rossmann-like
  4. 2106751Superfamily c.28.1: Cryptochrome/photolyase, N-terminal domain [52425] (2 families) (S)
    automatically mapped to Pfam PF00875
  5. 2106786Family c.28.1.0: automated matches [227292] (1 protein)
    not a true family
  6. 2106787Protein automated matches [227113] (2 species)
    not a true protein

Species:

  1. 2106788Fruit fly (Drosophila melanogaster) [TaxId:7227] [231380] (6 PDB entries)
    1. Domain for 2wb2:
    2. Domain for 2wq6:
    3. Domain for 2wq7:
    4. Domain for 3cvu:
    5. Domain for 3cvv:
    6. Domain for 3cvy:
  2. 2106795Mouse (Mus musculus) [TaxId:10090] [226619] (5 PDB entries)
    1. Domain for 4i6e:
    2. Domains for 4i6g:
      1. 2106800Domain d4i6ga1: 4i6g A:21-223 [234816]
        Other proteins in same PDB: d4i6ga2, d4i6gb2
        automated match to d4mlpd1
        complexed with fad
      2. 2106801Domain d4i6gb1: 4i6g B:21-223 [234818]
        Other proteins in same PDB: d4i6ga2, d4i6gb2
        automated match to d4mlpd1
        complexed with fad
    3. Domain for 4i6j:
    4. Domains for 4mlp:
      1. 2106796Domain d4mlpa1: 4mlp A:21-223 [228407]
        Other proteins in same PDB: d4mlpa2, d4mlpb2, d4mlpc2, d4mlpd2
        automated match to d4k0ra1
        complexed with 2cx
      2. 2106797Domain d4mlpb1: 4mlp B:21-223 [229903]
        Other proteins in same PDB: d4mlpa2, d4mlpb2, d4mlpc2, d4mlpd2
        automated match to d4mlpd1
        complexed with 2cx
      3. 2106798Domain d4mlpc1: 4mlp C:21-223 [229905]
        Other proteins in same PDB: d4mlpa2, d4mlpb2, d4mlpc2, d4mlpd2
        automated match to d4mlpd1
        complexed with 2cx
      4. 2106799Domain d4mlpd1: 4mlp D:21-223 [228406]
        Other proteins in same PDB: d4mlpa2, d4mlpb2, d4mlpc2, d4mlpd2
        automated match to d4k0ra1
        complexed with 2cx
    5. Domains for 4u8h:
      1. 2106804Domain d4u8ha1: 4u8h A:21-223 [260074]
        Other proteins in same PDB: d4u8ha2, d4u8hc2
        automated match to d4mlpa1
        complexed with zn
      2. 2106805Domain d4u8hc1: 4u8h C:21-223 [260076]
        Other proteins in same PDB: d4u8ha2, d4u8hc2
        automated match to d4mlpa1
        complexed with zn

More info for Protein automated matches from c.28.1.0: automated matches

Timeline for Protein automated matches from c.28.1.0: automated matches: