Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2054165Fold b.43: Reductase/isomerase/elongation factor common domain [50412] (4 superfamilies)
    barrel, closed; n=6, S=10; greek-key
  4. 2054655Superfamily b.43.4: Riboflavin synthase domain-like [63380] (4 families) (S)
  5. 2054656Family b.43.4.1: NADPH-cytochrome p450 reductase FAD-binding domain-like [50438] (4 protein domains)
    there is an alpha-helical subdomain inserted in this domain
    automatically mapped to Pfam PF00667
  6. 2054677Protein automated matches [227066] (3 species)
    not a true protein

Species:

  1. 2054678Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [255832] (1 PDB entry)
  2. 2054680Human (Homo sapiens) [TaxId:9606] [226187] (7 PDB entries)
    1. Domains for 3qe2:
      1. 2054683Domain d3qe2a2: 3qe2 A:243-521 [248858]
        Other proteins in same PDB: d3qe2a1, d3qe2a3, d3qe2b1, d3qe2b3
        automated match to d1j9za1
        complexed with ca, fad, fmn, nap
      2. 2054684Domain d3qe2b2: 3qe2 B:246-521 [248861]
        Other proteins in same PDB: d3qe2a1, d3qe2a3, d3qe2b1, d3qe2b3
        automated match to d1j9za1
        complexed with ca, fad, fmn, nap
    2. Domains for 3qfc:
      1. 2054685Domain d3qfca2: 3qfc A:243-521 [248870]
        Other proteins in same PDB: d3qfca1, d3qfca3, d3qfcb1, d3qfcb3
        automated match to d1j9za1
        complexed with ca, fad, fmn, nap; mutant
      2. 2054686Domain d3qfcb2: 3qfc B:245-521 [248873]
        Other proteins in same PDB: d3qfca1, d3qfca3, d3qfcb1, d3qfcb3
        automated match to d1j9za1
        complexed with ca, fad, fmn, nap; mutant
    3. Domains for 3qfr:
      1. 2054687Domain d3qfra2: 3qfr A:243-521 [248876]
        Other proteins in same PDB: d3qfra1, d3qfra3, d3qfrb1, d3qfrb3
        automated match to d1j9za1
        complexed with ca, fad, fmn, nap; mutant
      2. 2054688Domain d3qfrb2: 3qfr B:243-521 [248879]
        Other proteins in same PDB: d3qfra1, d3qfra3, d3qfrb1, d3qfrb3
        automated match to d1j9za1
        complexed with ca, fad, fmn, nap; mutant
    4. Domain for 3qfs:
    5. Domain for 3qft:
    6. Domains for 5emn:
      1. 2277951Domain d5emnb2: 5emn B:245-521 [321252]
        Other proteins in same PDB: d5emna1, d5emna3, d5emnb1, d5emnb3
        automated match to d1j9za1
        complexed with fad, fmn, nap; mutant
      2. 2277963Domain d5emna2: 5emn A:245-521 [321264]
        Other proteins in same PDB: d5emna1, d5emna3, d5emnb1, d5emnb3
        automated match to d1j9za1
        complexed with fad, fmn, nap; mutant
    7. Domains for 5fa6:
      1. 2277966Domain d5fa6a2: 5fa6 A:243-521 [321267]
        Other proteins in same PDB: d5fa6a1, d5fa6a3, d5fa6b1, d5fa6b3
        automated match to d1j9za1
        complexed with fad, fmn, nap
      2. 2277990Domain d5fa6b2: 5fa6 B:244-521 [321291]
        Other proteins in same PDB: d5fa6a1, d5fa6a3, d5fa6b1, d5fa6b3
        automated match to d1j9za1
        complexed with fad, fmn, nap
  3. 2054689Norway rat (Rattus norvegicus) [TaxId:10116] [256000] (10 PDB entries)
    1. Domain for 3ojw:
    2. Domain for 3ojx:
    3. Domains for 4y7c:
      1. 2268584Domain d4y7ca2: 4y7c A:240-518 [311890]
        Other proteins in same PDB: d4y7ca1, d4y7ca3, d4y7cb1, d4y7cb3
        automated match to d1j9za1
        complexed with fad, fmn, nap, po4; mutant
      2. 2270978Domain d4y7cb2: 4y7c B:242-518 [314283]
        Other proteins in same PDB: d4y7ca1, d4y7ca3, d4y7cb1, d4y7cb3
        automated match to d1j9za1
        complexed with fad, fmn, nap, po4; mutant
    4. Domains for 4y9r:
      1. 2268579Domain d4y9ra2: 4y9r A:240-518 [311885]
        Other proteins in same PDB: d4y9ra1, d4y9ra3, d4y9rb1, d4y9rb3
        automated match to d1j9za1
        complexed with fad, fmn, nap, po4; mutant
      2. 2270618Domain d4y9rb2: 4y9r B:241-518 [313923]
        Other proteins in same PDB: d4y9ra1, d4y9ra3, d4y9rb1, d4y9rb3
        automated match to d1j9za1
        complexed with fad, fmn, nap, po4; mutant
    5. Domains for 4y9u:
      1. 2269175Domain d4y9ub2: 4y9u B:242-518 [312481]
        Other proteins in same PDB: d4y9ua1, d4y9ua3, d4y9ub1, d4y9ub3
        automated match to d1j9za1
      2. 2270624Domain d4y9ua2: 4y9u A:240-518 [313929]
        Other proteins in same PDB: d4y9ua1, d4y9ua3, d4y9ub1, d4y9ub3
        automated match to d1j9za1
        complexed with fad, fmn, nap, po4; mutant
    6. Domains for 4yaf:
      1. 2268942Domain d4yafa2: 4yaf A:240-518 [312248]
        Other proteins in same PDB: d4yafa1, d4yafa3, d4yafb1, d4yafb3
        automated match to d1j9za1
        complexed with 2am, fad, fmn, po4
      2. 2269133Domain d4yafb2: 4yaf B:241-518 [312439]
        Other proteins in same PDB: d4yafa1, d4yafa3, d4yafb1, d4yafb3
        automated match to d1j9za1
        complexed with 2am, fad, fmn, po4
    7. Domains for 4yal:
      1. 2268596Domain d4yalb2: 4yal B:242-518 [311902]
        Other proteins in same PDB: d4yala1, d4yala3, d4yalb1, d4yalb3
        automated match to d1j9za1
        complexed with 2am, fad, fmn, po4
      2. 2271067Domain d4yala2: 4yal A:240-518 [314372]
        Other proteins in same PDB: d4yala1, d4yala3, d4yalb1, d4yalb3
        automated match to d1j9za1
        complexed with 2am, fad, fmn, po4
    8. Domains for 4yao:
      1. 2268688Domain d4yaoa2: 4yao A:243-518 [311994]
        Other proteins in same PDB: d4yaoa1, d4yaoa3, d4yaob1, d4yaob3
        automated match to d1j9za1
        complexed with 2am, fad, fmn, po4; mutant
      2. 2268784Domain d4yaob2: 4yao B:242-518 [312090]
        Other proteins in same PDB: d4yaoa1, d4yaoa3, d4yaob1, d4yaob3
        automated match to d1j9za1
        complexed with 2am, fad, fmn, po4; mutant
    9. Domains for 4yau:
      1. 2268640Domain d4yaua2: 4yau A:240-518 [311946]
        Other proteins in same PDB: d4yaua1, d4yaua3, d4yaub1, d4yaub3
        automated match to d1j9za1
        complexed with 2am, fad, fmn, po4; mutant
      2. 2268664Domain d4yaub2: 4yau B:242-518 [311970]
        Other proteins in same PDB: d4yaua1, d4yaua3, d4yaub1, d4yaub3
        automated match to d1j9za1
        complexed with 2am, fad, fmn, po4; mutant
    10. Domains for 4yaw:
      1. 2268631Domain d4yawb2: 4yaw B:242-518 [311937]
        Other proteins in same PDB: d4yawa1, d4yawa3, d4yawb1, d4yawb3
        automated match to d1j9za1
        complexed with 2am, fad, fmn, po4; mutant
      2. 2270657Domain d4yawa2: 4yaw A:240-518 [313962]
        Other proteins in same PDB: d4yawa1, d4yawa3, d4yawb1, d4yawb3
        automated match to d1j9za1
        complexed with 2am, fad, fmn, po4; mutant

More info for Protein automated matches from b.43.4.1: NADPH-cytochrome p450 reductase FAD-binding domain-like

Timeline for Protein automated matches from b.43.4.1: NADPH-cytochrome p450 reductase FAD-binding domain-like:

  • Protein automated matches from b.43.4.1: NADPH-cytochrome p450 reductase FAD-binding domain-like first appeared in SCOPe 2.03
  • Protein automated matches from b.43.4.1: NADPH-cytochrome p450 reductase FAD-binding domain-like appears in SCOPe 2.05