SCOPe 2.03: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.03
Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
Fold d.129: TBP-like [55944] (11 superfamilies)
beta-alpha-beta(4)-alpha
Superfamily d.129.1: TATA-box binding protein-like [55945] (3 families)
Family d.129.1.0: automated matches [227265] (1 protein)
not a true family
Protein automated matches [227057] (3 species)
not a true protein

Species:

Arabidopsis thaliana [TaxId:3702] [230343] (2 PDB entries)
1. Domains for 1vtl:
  1. Domain d1vtle1: 1vtl E:13-106 [230344]
    automated match to d1mp9a1
    protein/DNA complex
  2. Domain d1vtle2: 1vtl E:107-198 [230345]
    automated match to d1mp9a2
    protein/DNA complex
  3. Domain d1vtlf1: 1vtl F:13-106 [230346]
    automated match to d1mp9a1
    protein/DNA complex
  4. Domain d1vtlf2: 1vtl F:107-198 [230347]
    automated match to d1mp9a2
    protein/DNA complex
2. Domains for 1vto:
  1. Domain d1vtoa1: 1vto A:12-106 [230348]
    automated match to d1mp9a1
    protein/DNA complex
  2. Domain d1vtoa2: 1vto A:107-198 [230349]
    automated match to d1mp9a2
    protein/DNA complex
  3. Domain d1vtob1: 1vto B:1011-1106 [230350]
    automated match to d1mp9a1
    protein/DNA complex
  4. Domain d1vtob2: 1vto B:1107-1198 [230351]
    automated match to d1mp9a2
    protein/DNA complex
Encephalitozoon cuniculi [TaxId:6035] [232060] (2 PDB entries)
1. Domains for 3eik:
  1. Domain d3eika1: 3eik A:20-113 [232061]
    automated match to d1ytba1
    complexed with edo
  2. Domain d3eika2: 3eik A:114-197 [232087]
    automated match to d1ytba2
    complexed with edo
  3. Domain d3eikb1: 3eik B:20-113 [232062]
    automated match to d1ytba1
    complexed with edo
  4. Domain d3eikb2: 3eik B:114-198 [232094]
    automated match to d1ytba2
    complexed with edo
2. Domains for 3oci:
  1. Domain d3ocia1: 3oci A:19-113 [233067]
    automated match to d1ytba1
    complexed with edo
  2. Domain d3ocia2: 3oci A:114-197 [233068]
    automated match to d1ytba2
    complexed with edo
  3. Domain d3ocib1: 3oci B:19-113 [233069]
    automated match to d1ytba1
  4. Domain d3ocib2: 3oci B:114-198 [233070]
    automated match to d1ytba2
Human (Homo sapiens) [TaxId:9606] [226065] (1 PDB entry)
- Domain for 2xhi:
  - Domain d2xhia1: 2xhi A:10-135 [207254]
    Other proteins in same PDB: d2xhia2
    automated match to d1m3qa2
    protein/DNA complex; complexed with ca; mutant

More info for Protein automated matches from d.129.1.0: automated matches

Timeline for Protein automated matches from d.129.1.0: automated matches:

Protein automated matches from d.129.1.0: automated matches is new in SCOPe 2.03-stable
Protein automated matches from d.129.1.0: automated matches appears in SCOPe 2.04
Protein automated matches from d.129.1.0: automated matches appears in the current release, SCOPe 2.08