Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2978525Fold d.142: ATP-grasp [56058] (2 superfamilies)
    Consists of two subdomains with different alpha+beta folds
    shares functional and structural similarities with the PIPK and protein kinase superfamilies
  4. 2979301Superfamily d.142.2: DNA ligase/mRNA capping enzyme, catalytic domain [56091] (6 families) (S)
    has a circularly permuted topology
  5. 2979381Family d.142.2.0: automated matches [227263] (1 protein)
    not a true family
  6. 2979382Protein automated matches [227054] (5 species)
    not a true protein

Species:

  1. 2979383Haemophilus influenzae [TaxId:71421] [226287] (1 PDB entry)
  2. 2979385Haemophilus influenzae [TaxId:727] [226055] (8 PDB entries)
    1. Domain for 3pn1:
    2. Domain for 4uco:
    3. Domain for 4ucr:
    4. Domain for 4ucs:
    5. Domain for 4uct:
    6. Domain for 4ucu:
    7. Domain for 4ucv:
    8. Domain for 4ufz:
  3. 2979394Mycobacterium tuberculosis [TaxId:1773] [255006] (1 PDB entry)
  4. 2979396Mycobacterium tuberculosis [TaxId:83332] [388491] (8 PDB entries)
    1. Domain for 6kdu:
    2. Domain for 6kjm:
    3. Domain for 6kkv:
    4. Domain for 6krh:
    5. Domain for 6ksc:
    6. Domain for 6ksd:
    7. Domain for 6lw8:
    8. Domains for 7k72:
      1. 2979397Domain d7k72a_: 7k72 A: [394692]
        automated match to d1zaua_
        complexed with ca, mg, mpd, nad
      2. 2979398Domain d7k72b_: 7k72 B: [394842]
        automated match to d1zaua_
        complexed with ca, mg, mpd, nad
      3. 2979399Domain d7k72c_: 7k72 C: [394780]
        automated match to d1zaua_
        complexed with ca, mg, mpd, nad
      4. 2979400Domain d7k72d_: 7k72 D: [394825]
        automated match to d1zaua_
        complexed with ca, mg, mpd, nad
  5. 2979408Staphylococcus aureus [TaxId:1280] [256598] (2 PDB entries)
    1. Domain for 4cc5:
    2. Domain for 4cc6:

More info for Protein automated matches from d.142.2.0: automated matches

Timeline for Protein automated matches from d.142.2.0: automated matches: