SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.73: Retrovirus capsid protein, N-terminal core domain [47942] (1 superfamily)
core: 5 helices; bundle
Superfamily a.73.1: Retrovirus capsid protein, N-terminal core domain [47943] (2 families)
Family a.73.1.0: automated matches [227254] (1 protein)
not a true family
Protein automated matches [227039] (3 species)
not a true protein

Species:

Bovine leukemia virus [TaxId:11901] [273631] (3 PDB entries)
1. Domains for 4ph0:
  1. Domain d4ph0a1: 4ph0 A:1-126 [273640]
    Other proteins in same PDB: d4ph0a2, d4ph0b2, d4ph0c2, d4ph0d2, d4ph0e2, d4ph0f2
    automated match to d1qrja2
  2. Domain d4ph0b1: 4ph0 B:1-124 [300217]
    Other proteins in same PDB: d4ph0a2, d4ph0b2, d4ph0c2, d4ph0d2, d4ph0e2, d4ph0f2
    automated match to d4ph0a1
  3. Domain d4ph0c1: 4ph0 C:1-126 [300219]
    Other proteins in same PDB: d4ph0a2, d4ph0b2, d4ph0c2, d4ph0d2, d4ph0e2, d4ph0f2
    automated match to d4ph0a1
  4. Domain d4ph0d1: 4ph0 D:1-125 [273637]
    Other proteins in same PDB: d4ph0a2, d4ph0b2, d4ph0c2, d4ph0d2, d4ph0e2, d4ph0f2
    automated match to d1qrja2
  5. Domain d4ph0e1: 4ph0 E:1-123 [300221]
    Other proteins in same PDB: d4ph0a2, d4ph0b2, d4ph0c2, d4ph0d2, d4ph0e2, d4ph0f2
    automated match to d4ph0a1
  6. Domain d4ph0f1: 4ph0 F:1-126 [300223]
    Other proteins in same PDB: d4ph0a2, d4ph0b2, d4ph0c2, d4ph0d2, d4ph0e2, d4ph0f2
    automated match to d4ph0a1
2. Domains for 4ph2:
  1. Domain d4ph2a_: 4ph2 A: [273633]
    automated match to d1g03a_
    complexed with gol, so4
  2. Domain d4ph2b_: 4ph2 B: [273634]
    automated match to d1g03a_
    complexed with gol, so4
3. Domains for 4ph3:
  1. Domain d4ph3a_: 4ph3 A: [273635]
    automated match to d1g03a_
    complexed with gol, iod
  2. Domain d4ph3b_: 4ph3 B: [273636]
    automated match to d1g03a_
    complexed with gol, iod
Microcebus murinus [TaxId:30608] [225978] (1 PDB entry)
- Domain for 2xgv:
  - Domain d2xgva_: 2xgv A: [207218]
    automated match to d2pwob_
Rabbit (Oryctolagus cuniculus) [TaxId:9986] [225977] (1 PDB entry)
- Domain for 2xgy:
  - Domain d2xgya_: 2xgy A: [198606]
    Other proteins in same PDB: d2xgyb_
    automated match to d2xdea_
    complexed with gol

More info for Protein automated matches from a.73.1.0: automated matches

Timeline for Protein automated matches from a.73.1.0: automated matches:

Protein automated matches from a.73.1.0: automated matches first appeared in SCOPe 2.03
Protein automated matches from a.73.1.0: automated matches appears in SCOPe 2.07